More than 300 homologs were found in PanDaTox collection
for query gene Strop_0832 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  58.44 
 
 		 551 aa  635    Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  96.77 
 
 		 527 aa  1041    Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  61.04 
 
 		 551 aa  640    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  59.96 
 
 		 559 aa  653    Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  79.58 
 
 		 526 aa  845    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  59.62 
 
 		 521 aa  641    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009380  Strop_0832  methylmalonyl-CoA mutase, large subunit  100 
 
 		 547 aa  1118    Salinispora tropica CNB-440  Bacteria  normal  0.682429  normal  0.0142114 
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  63.48 
 
 		 531 aa  667    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  59.55 
 
 		 537 aa  647    Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  59.71 
 
 		 560 aa  661    Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0726  methylmalonyl-CoA mutase, large subunit  62.6 
 
 		 526 aa  646    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  77.82 
 
 		 527 aa  824    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  61.54 
 
 		 529 aa  632  1e-180  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  60.44 
 
 		 550 aa  631  1e-180  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  60.28 
 
 		 552 aa  631  1e-179  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  56.41 
 
 		 559 aa  629  1e-179  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  60.64 
 
 		 552 aa  630  1e-179  Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  60.23 
 
 		 549 aa  631  1e-179  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  61 
 
 		 542 aa  631  1e-179  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_009972  Haur_4552  methylmalonyl-CoA mutase, large subunit  60.42 
 
 		 521 aa  627  1e-178  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  60.43 
 
 		 518 aa  625  1e-178  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.380206 
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  58.63 
 
 		 551 aa  622  1e-177  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_013739  Cwoe_5523  methylmalonyl-CoA mutase, large subunit  58.93 
 
 		 537 aa  619  1e-176  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  57.14 
 
 		 559 aa  617  1e-175  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  57.33 
 
 		 554 aa  615  1e-175  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  55.62 
 
 		 559 aa  612  9.999999999999999e-175  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  59.16 
 
 		 549 aa  602  1.0000000000000001e-171  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  55.45 
 
 		 545 aa  603  1.0000000000000001e-171  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  59.16 
 
 		 549 aa  602  1.0000000000000001e-171  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  59.16 
 
 		 549 aa  601  1e-170  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  57.64 
 
 		 517 aa  600  1e-170  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.593051 
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  56.31 
 
 		 558 aa  595  1e-169  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_008554  Sfum_0458  methylmalonyl-CoA mutase, large subunit  53.6 
 
 		 559 aa  591  1e-167  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.484451  normal  0.420898 
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  54.47 
 
 		 559 aa  583  1.0000000000000001e-165  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_3607  methylmalonyl-CoA mutase, large subunit  55.36 
 
 		 515 aa  584  1.0000000000000001e-165  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  53.22 
 
 		 570 aa  580  1e-164  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  54 
 
 		 565 aa  580  1e-164  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013743  Htur_1992  methylmalonyl-CoA mutase, large subunit  55.53 
 
 		 560 aa  580  1e-164  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  57.23 
 
 		 560 aa  580  1e-164  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  55.53 
 
 		 560 aa  573  1.0000000000000001e-162  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  53.47 
 
 		 557 aa  571  1e-161  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  53.86 
 
 		 563 aa  569  1e-161  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  52.51 
 
 		 559 aa  567  1e-160  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  51.63 
 
 		 532 aa  568  1e-160  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  53.49 
 
 		 550 aa  567  1e-160  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_009440  Msed_0638  methylmalonyl-CoA mutase  52.35 
 
 		 553 aa  559  1e-158  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  0.187219 
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  53.73 
 
 		 564 aa  554  1e-156  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal  1 
 
 
-
 
NC_008009  Acid345_1454  methylmalonyl-CoA mutase  52.43 
 
 		 599 aa  553  1e-156  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  54.33 
 
 		 551 aa  552  1e-156  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  50.91 
 
 		 588 aa  550  1e-155  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  50.73 
 
 		 588 aa  548  1e-154  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  50.55 
 
 		 588 aa  546  1e-154  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  54.13 
 
 		 548 aa  546  1e-154  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.473507 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  51.65 
 
 		 555 aa  547  1e-154  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  52.77 
 
 		 543 aa  547  1e-154  Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal  1 
 
 
-
 
NC_009253  Dred_1768  methylmalonyl-CoA mutase, large subunit  50.76 
 
 		 560 aa  548  1e-154  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0288235  n/a   
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  50.38 
 
 		 553 aa  542  1e-153  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1909  methylmalonyl-CoA mutase, large subunit  49.24 
 
 		 560 aa  543  1e-153  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.699759  normal  0.051216 
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  53.94 
 
 		 551 aa  544  1e-153  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1703  Methylmalonyl-CoA mutase  49.82 
 
 		 555 aa  536  1e-151  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.236995 
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  49.44 
 
 		 566 aa  526  1e-148  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000166 
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  51.36 
 
 		 569 aa  523  1e-147  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR1190  methylmalonyl-CoA mutase  50.83 
 
 		 712 aa  520  1e-146  Brucella suis 1330  Bacteria  normal  0.942727  n/a   
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  53.77 
 
 		 709 aa  519  1e-146  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  52.49 
 
 		 718 aa  518  1e-146  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0321557 
 
 
-
 
NC_013124  Afer_1791  methylmalonyl-CoA mutase, large subunit  54.02 
 
 		 556 aa  519  1e-146  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0908947  n/a   
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  54.17 
 
 		 712 aa  521  1e-146  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal  1 
 
 
-
 
NC_009667  Oant_2001  methylmalonyl-CoA mutase  52.34 
 
 		 714 aa  518  1e-146  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  53.97 
 
 		 709 aa  521  1e-146  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal  1 
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  52.32 
 
 		 720 aa  516  1.0000000000000001e-145  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1988  methylmalonyl-CoA mutase, large subunit  51.43 
 
 		 588 aa  518  1.0000000000000001e-145  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  49.34 
 
 		 567 aa  516  1.0000000000000001e-145  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  52.32 
 
 		 720 aa  517  1.0000000000000001e-145  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  47.75 
 
 		 566 aa  514  1e-144  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  48.38 
 
 		 563 aa  513  1e-144  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  48.87 
 
 		 566 aa  514  1e-144  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008752  Aave_2510  methylmalonyl-CoA mutase  52.9 
 
 		 722 aa  514  1e-144  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.178476 
 
 
-
 
NC_008825  Mpe_A1014  methylmalonyl-CoA mutase  52.61 
 
 		 719 aa  512  1e-144  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.856859 
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  46.8 
 
 		 566 aa  509  1e-143  Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  51.43 
 
 		 706 aa  510  1e-143  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_008781  Pnap_2383  methylmalonyl-CoA mutase  52.32 
 
 		 718 aa  511  1e-143  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007514  Cag_1223  methylmalonyl-CoA mutase  50.96 
 
 		 712 aa  508  9.999999999999999e-143  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_4310  methylmalonyl-CoA mutase, large subunit  49.62 
 
 		 525 aa  506  9.999999999999999e-143  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.57946 
 
 
-
 
NC_008025  Dgeo_1320  methylmalonyl-CoA mutase  52.88 
 
 		 722 aa  506  9.999999999999999e-143  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013169  Ksed_22170  methylmalonyl-CoA mutase  52.22 
 
 		 754 aa  506  9.999999999999999e-143  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.366718  normal  0.398515 
 
 
-
 
NC_007298  Daro_4006  methylmalonyl-CoA mutase  49.9 
 
 		 716 aa  503  1e-141  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  49.32 
 
 		 716 aa  503  1e-141  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17991 
 
 
-
 
NC_011371  Rleg2_6511  methylmalonyl-CoA mutase  53.7 
 
 		 712 aa  503  1e-141  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  47.2 
 
 		 562 aa  503  1e-141  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.000975641 
 
 
-
 
NC_009428  Rsph17025_2300  methylmalonyl-CoA mutase  52.72 
 
 		 709 aa  504  1e-141  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_2238  methylmalonyl-CoA mutase  50.87 
 
 		 722 aa  500  1e-140  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_1292  methylmalonyl-CoA mutase  51.5 
 
 		 714 aa  501  1e-140  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  0.816153 
 
 
-
 
NC_011353  ECH74115_4213  methylmalonyl-CoA mutase  51.07 
 
 		 714 aa  499  1e-140  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3367  methylmalonyl-CoA mutase  52.33 
 
 		 709 aa  500  1e-140  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_2127  methylmalonyl-CoA mutase  51.45 
 
 		 720 aa  501  1e-140  Variovorax paradoxus S110  Bacteria  normal  0.063815  n/a   
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  51.46 
 
 		 713 aa  501  1e-140  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2387  methylmalonyl-CoA mutase, large subunit  48.17 
 
 		 557 aa  500  1e-140  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.415653  normal  1 
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  47.98 
 
 		 562 aa  496  1e-139  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal  1 
 
 
-
 
NC_010498  EcSMS35_3053  methylmalonyl-CoA mutase  51.07 
 
 		 714 aa  497  1e-139  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_2638  methylmalonyl-CoA mutase  50.1 
 
 		 720 aa  498  1e-139  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
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