More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0719 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0719  response regulator receiver modulated diguanylate cyclase  100 
 
 
307 aa  623  1e-177  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1643  GGDEF/response regulator receiver domain-containing protein  35.53 
 
 
316 aa  168  1e-40  Geobacter sulfurreducens PCA  Bacteria  normal  0.176359  n/a   
 
 
-
 
NC_013173  Dbac_1483  response regulator receiver modulated diguanylate cyclase  33.84 
 
 
335 aa  166  2.9999999999999998e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.882912  n/a   
 
 
-
 
NC_012918  GM21_2951  response regulator receiver modulated diguanylate cyclase  36.36 
 
 
306 aa  166  6.9999999999999995e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_1525  response regulator receiver modulated diguanylate cyclase  35.62 
 
 
316 aa  165  8e-40  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.15223e-23 
 
 
-
 
NC_007517  Gmet_0069  response regulator receiver modulated diguanylate cyclase  36.27 
 
 
314 aa  164  1.0000000000000001e-39  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.840661 
 
 
-
 
NC_011146  Gbem_1332  response regulator receiver modulated diguanylate cyclase  35.39 
 
 
306 aa  162  5.0000000000000005e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2715  response regulator receiver modulated diguanylate cyclase  35.24 
 
 
314 aa  162  5.0000000000000005e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0195  response regulator receiver modulated diguanylate cyclase  36.09 
 
 
309 aa  161  1e-38  Geobacter uraniireducens Rf4  Bacteria  normal  0.0106599  n/a   
 
 
-
 
NC_010814  Glov_3614  response regulator receiver modulated diguanylate cyclase  36.18 
 
 
310 aa  159  8e-38  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3376  GGDEF/response regulator receiver domain-containing protein  35.86 
 
 
308 aa  156  3e-37  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  34.33 
 
 
322 aa  156  3e-37  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  32.9 
 
 
317 aa  156  5.0000000000000005e-37  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2693  diguanylate cyclase  35 
 
 
302 aa  155  7e-37  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1597  response regulator receiver modulated diguanylate cyclase  35.81 
 
 
313 aa  155  1e-36  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2463  response regulator receiver modulated diguanylate cyclase  35.14 
 
 
301 aa  155  1e-36  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2442  response regulator receiver modulated diguanylate cyclase  34.55 
 
 
316 aa  153  2.9999999999999998e-36  Geobacter lovleyi SZ  Bacteria  normal  0.103678  n/a   
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  36.28 
 
 
322 aa  153  2.9999999999999998e-36  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  36.16 
 
 
322 aa  153  2.9999999999999998e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0963  response regulator receiver modulated diguanylate cyclase  36.3 
 
 
300 aa  152  5.9999999999999996e-36  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1846  response regulator receiver modulated diguanylate cyclase  34.98 
 
 
314 aa  152  7e-36  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  32 
 
 
308 aa  151  1e-35  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  32 
 
 
308 aa  151  1e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007912  Sde_3005  response regulator receiver modulated diguanylate cyclase  32.79 
 
 
303 aa  151  1e-35  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.000288968 
 
 
-
 
NC_007912  Sde_2383  response regulator receiver modulated diguanylate cyclase  32.77 
 
 
434 aa  150  2e-35  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00665942 
 
 
-
 
NC_007413  Ava_1030  response regulator receiver modulated diguanylate cyclase  33.44 
 
 
330 aa  149  5e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.33399 
 
 
-
 
NC_007760  Adeh_3473  response regulator receiver modulated diguanylate cyclase  36.74 
 
 
351 aa  149  5e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  35 
 
 
317 aa  149  6e-35  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  35 
 
 
317 aa  149  6e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_3583  response regulator receiver modulated diguanylate cyclase  34.63 
 
 
322 aa  146  5e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.000864033 
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  34.14 
 
 
302 aa  145  6e-34  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1974  response regulator receiver modulated diguanylate cyclase  34.56 
 
 
340 aa  146  6e-34  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.098619 
 
 
-
 
NC_008346  Swol_0600  response regulator receiver protein  35.23 
 
 
301 aa  145  1e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0748  response regulator receiver protein  33.33 
 
 
312 aa  144  2e-33  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2326  response regulator receiver modulated diguanylate cyclase  32.76 
 
 
536 aa  143  4e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007575  Suden_1780  diguanylate cyclase  32.23 
 
 
414 aa  142  7e-33  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0841  response regulator receiver modulated diguanylate cyclase  33.33 
 
 
715 aa  142  7e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.101081  normal 
 
 
-
 
NC_008576  Mmc1_3528  response regulator receiver modulated diguanylate cyclase  33.33 
 
 
310 aa  141  9.999999999999999e-33  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2233  response regulator receiver modulated diguanylate cyclase  34.11 
 
 
428 aa  140  1.9999999999999998e-32  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0119  response regulator receiver modulated diguanylate cyclase  32.5 
 
 
324 aa  140  1.9999999999999998e-32  Maricaulis maris MCS10  Bacteria  normal  0.969085  normal 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  33.12 
 
 
319 aa  140  3e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3170  response regulator receiver modulated diguanylate cyclase  33.13 
 
 
344 aa  140  3e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.103544 
 
 
-
 
NC_009802  CCC13826_1984  threonine dehydratase  32.01 
 
 
418 aa  140  3e-32  Campylobacter concisus 13826  Bacteria  normal  0.241676  n/a   
 
 
-
 
NC_013512  Sdel_0659  diguanylate cyclase  31.99 
 
 
417 aa  140  3e-32  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0149639  n/a   
 
 
-
 
NC_007484  Noc_0847  two component diguanylate cyclase  32.62 
 
 
327 aa  139  4.999999999999999e-32  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3851  response regulator receiver modulated diguanylate cyclase  32.8 
 
 
634 aa  139  4.999999999999999e-32  Thauera sp. MZ1T  Bacteria  normal  0.0571122  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  32.03 
 
 
310 aa  139  6e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0723  response regulator receiver modulated diguanylate cyclase  34.8 
 
 
540 aa  139  7e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU3350  sensor histidine kinase/GGDEF domain-containing protein  35.95 
 
 
565 aa  138  1e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  31.9 
 
 
337 aa  138  1e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  34.24 
 
 
308 aa  138  1e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0133  response regulator receiver modulated diguanylate cyclase  31.83 
 
 
461 aa  138  1e-31  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2313  response regulator  34.77 
 
 
301 aa  137  2e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.483613  n/a   
 
 
-
 
NC_013522  Taci_0157  response regulator receiver modulated diguanylate cyclase  32.88 
 
 
917 aa  137  2e-31  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0319  two component diguanylate cyclase  33.94 
 
 
661 aa  137  2e-31  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  34.8 
 
 
308 aa  137  2e-31  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0602  response regulator receiver modulated diguanylate cyclase  33.45 
 
 
451 aa  137  3.0000000000000003e-31  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1554  response regulator receiver modulated diguanylate cyclase  31.92 
 
 
419 aa  137  3.0000000000000003e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1372  response regulator receiver modulated diguanylate cyclase  32.56 
 
 
436 aa  137  3.0000000000000003e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.738866  normal  0.941955 
 
 
-
 
NC_008463  PA14_64050  putative two-component response regulator  35.03 
 
 
542 aa  136  6.0000000000000005e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4602  response regulator receiver modulated diguanylate cyclase  33.45 
 
 
459 aa  135  9e-31  Pseudomonas putida W619  Bacteria  normal  normal  0.195913 
 
 
-
 
NC_002947  PP_0563  response regulator receiver modulated diguanylate cyclase  33.11 
 
 
451 aa  135  9.999999999999999e-31  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  32.4 
 
 
322 aa  134  9.999999999999999e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_007760  Adeh_1556  response regulator receiver modulated diguanylate cyclase  35.49 
 
 
300 aa  135  9.999999999999999e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1193  diguanylate cyclase  33.11 
 
 
415 aa  135  9.999999999999999e-31  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2192  response regulator receiver modulated diguanylate cyclase  32.89 
 
 
303 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0221  response regulator PleD  30.72 
 
 
460 aa  134  1.9999999999999998e-30  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  32.34 
 
 
312 aa  134  1.9999999999999998e-30  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  35.22 
 
 
434 aa  134  1.9999999999999998e-30  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_007005  Psyr_2939  GGDEF  32.34 
 
 
318 aa  134  1.9999999999999998e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.417006  normal 
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  35.22 
 
 
434 aa  134  1.9999999999999998e-30  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_010322  PputGB1_0608  response regulator receiver modulated diguanylate cyclase  33.11 
 
 
452 aa  134  1.9999999999999998e-30  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0597995 
 
 
-
 
NC_008228  Patl_2089  diguanylate cyclase  31.53 
 
 
306 aa  134  1.9999999999999998e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  32.9 
 
 
304 aa  133  3e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_009675  Anae109_2257  response regulator receiver modulated diguanylate cyclase  36.08 
 
 
509 aa  133  3.9999999999999996e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0520127 
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  31.44 
 
 
316 aa  133  3.9999999999999996e-30  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3967  putative response regulator of a two-component system  32.92 
 
 
335 aa  132  5e-30  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000645274  normal  0.0110626 
 
 
-
 
NC_009656  PSPA7_5563  putative two-component response regulator  33.67 
 
 
542 aa  132  6e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.591571  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  30.89 
 
 
314 aa  132  6.999999999999999e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1645  response regulator receiver modulated diguanylate cyclase  33.22 
 
 
308 aa  132  9e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.456967 
 
 
-
 
NC_007492  Pfl01_0623  response regulator receiver modulated diguanylate cyclase  32.67 
 
 
556 aa  131  1.0000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.322116  normal 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  31.18 
 
 
353 aa  132  1.0000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_010505  Mrad2831_0755  response regulator receiver modulated diguanylate cyclase  32.79 
 
 
298 aa  132  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.893944 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  33.76 
 
 
349 aa  131  1.0000000000000001e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4837  response regulator  31.53 
 
 
551 aa  130  2.0000000000000002e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.978785  n/a   
 
 
-
 
NC_010002  Daci_1507  response regulator receiver modulated diguanylate cyclase  33.89 
 
 
308 aa  130  2.0000000000000002e-29  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.914031 
 
 
-
 
NC_009485  BBta_4746  response regulator PleD  32.56 
 
 
466 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0979514  normal  0.753316 
 
 
-
 
NC_011830  Dhaf_1561  response regulator receiver modulated diguanylate cyclase  31.48 
 
 
455 aa  130  2.0000000000000002e-29  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000734361  n/a   
 
 
-
 
NC_007778  RPB_2521  diguanylate cyclase  44.91 
 
 
350 aa  131  2.0000000000000002e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.848783 
 
 
-
 
NC_002977  MCA1203  response regulator  31.85 
 
 
634 aa  130  3e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3647  response regulator receiver modulated diguanylate cyclase  33.12 
 
 
359 aa  130  3e-29  Ralstonia eutropha JMP134  Bacteria  normal  0.745021  n/a   
 
 
-
 
NC_008228  Patl_3542  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.38 
 
 
590 aa  130  3e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1978  diguanylate cyclase  33.78 
 
 
298 aa  129  4.0000000000000003e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.148602  normal 
 
 
-
 
NC_008700  Sama_1511  response regulator receiver protein  34.75 
 
 
416 aa  129  4.0000000000000003e-29  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00466  Putative two-component system regulatory protein with GGDEF domain  32.2 
 
 
414 aa  129  5.0000000000000004e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.6149  n/a   
 
 
-
 
NC_011138  MADE_02505  putative response regulator  29.97 
 
 
306 aa  129  6e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  33.44 
 
 
941 aa  129  6e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_1432  response regulator PleD  34.32 
 
 
457 aa  129  7.000000000000001e-29  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1494  response regulator/GGDEF domain-containing protein  32.2 
 
 
335 aa  129  8.000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  normal  0.799611 
 
 
-
 
NC_011757  Mchl_2255  response regulator receiver modulated diguanylate cyclase  33.78 
 
 
298 aa  129  8.000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>