| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0602 |
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| Symbol | |
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| ID | 5194258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 673950 |
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| End bp | 675305 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585054 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001265954 |
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| Protein GI | 148545852 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CAGTCGAGCC GAGCCCGCAG TGCCCCGTCC AACAGTTGAC GCGTAACGGC
CTGCGCAAGG ACGACCCGCT CGACCCGCTG CTGCTGCCCG TGCGCAAACC GGTGTACATC
CTGCTGCAGG ACCACGAGCG CGCCCAGCGC CTGGCCCAGC AACTGGAATT CTTTGGTCTG
GTGGTGCAAG CGTTGCCCAG CGCCGCAGCG TTTCTCGCCT CGATCAGCGA GTACCCGCCT
TCGGCCATCA TCATGGATGT CGACTTCACC GGCGCCGGCC TGGGCTTGCT GCTGGCTGCT
CGGGTGCAGC AGGGCCTGGC ACGCGCCATT CCGTTGCTGT TCTTCAGCCA TCACGAAGCC
GACACCCCGA CCCGCCTTGC CGCAGTACGC GCCGGTGGCC AGGACTTTCT CACCGGCAGC
CTGGAAGCTT CCAGCTTGCT GGAAAAGGTC GAACTGCTGA CCAACGCCAC CCCGCACGAC
CCGCTGCGCG TGTTGATCAT CGACGATTCG CGCACCCAGG CCCTGTACAC CGAGCGTGTA
CTGGCCGGCG CCGGCATGCT CACCCGCAGC CTGACCGACC CGATCCGCAC CATGGCCGAG
CTTGCCGACT TCCAGCCCGA CCTGATCATC CTCGACCTGT ACATGCCGGC CTGCACCGGC
CCGGAGCTGG CCAAGGTAAT CCGCCACAGT GACCGTTATG TGAGCGTGCC GATCATCTAC
CTGTCTGCCG AGGACGACCT GGACAAGCAA CTGGATGCCA TGAGCGAAGG CGGTGATGAC
TTTTTGACCA AGCCGTTTCG CTCACGCCAC CTGATCACTA CCGTGCGCAA CCGCGCCGCC
CGCGCCCGCC ATTTGAAGGC ACGCATGGTC CGCGACAGCC TGACCGGGCT GTACAACCAC
ACCCATATCC TGCAGTTGCT GGAAGACTGC AGCTTCCGCG CCCGCCGTGA GCAGCATCCG
TTGAGCTTTG CCATGCTCGA CATCGACCAC TTCAAGAAGA TCAACGACCG CCACGGCCAC
CCCATGGGCG ACCGCGTGAT CAAGAGCCTT GCCCTATTCC TCAAGCAGCG CTTGCGCAAG
ACCGACTTTA TTGGCCGCTA CGGTGGCGAA GAGTTTGCCA TCGTCATGCC CAATACCGCG
CTGGACGCCG CACACAAGGT GCTGGACGAA ATTCGCCGGC GCTTTGCCGA CATTCTCTAC
CCGGCGCAGC CGCGGGATTT GCAGTGCACC TTCAGTGCAG GGGTGGTGCA ACTGGATGAG
GGGCTGGATG CACTGACCAT GGCCAGTGCA GCGGACGAGG CGCTGTACCG GGCCAAGCAT
GCGGGGCGTA ATTGCGTCGT TCGTGTAGAG CCCTGA
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| Protein sequence | MSQAVEPSPQ CPVQQLTRNG LRKDDPLDPL LLPVRKPVYI LLQDHERAQR LAQQLEFFGL
VVQALPSAAA FLASISEYPP SAIIMDVDFT GAGLGLLLAA RVQQGLARAI PLLFFSHHEA
DTPTRLAAVR AGGQDFLTGS LEASSLLEKV ELLTNATPHD PLRVLIIDDS RTQALYTERV
LAGAGMLTRS LTDPIRTMAE LADFQPDLII LDLYMPACTG PELAKVIRHS DRYVSVPIIY
LSAEDDLDKQ LDAMSEGGDD FLTKPFRSRH LITTVRNRAA RARHLKARMV RDSLTGLYNH
THILQLLEDC SFRARREQHP LSFAMLDIDH FKKINDRHGH PMGDRVIKSL ALFLKQRLRK
TDFIGRYGGE EFAIVMPNTA LDAAHKVLDE IRRRFADILY PAQPRDLQCT FSAGVVQLDE
GLDALTMASA ADEALYRAKH AGRNCVVRVE P
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