| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2233 |
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| Symbol | |
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| ID | 4709511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2448316 |
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| End bp | 2449602 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856709 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001003799 |
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| Protein GI | 121999012 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGAGG AGCAGCGCGT CGCCGATTGC GTCCTGGTGG TGGAGGATAG CCGTGCCGTG
GCCGGCTGGC TGGCCGGGCG CATCGAGGAC GCCCTGGGCC TGCGGGCGCT GGTCGCCGGC
AGCCGCGCAG CGGCTCGGGA GTGGCTGCAC ACCCATGCGG AGCGCATCAG TGCCGCGGTG
CTCGATCTGG ATCTGCCGGA TGCGCCCCAC GGCGAGGTGG CCGGGGACCT GGTGGAGCGG
CAGATCCCGT CGGTGGTCCT GACCGCCACC ATCGAAGACG ACCTGCGCGA CCAGCTCGTC
GCCGCCGGCG TCTGCGATTA CGTCCTCAAG GACGCCCCGG ATGCCATTGA CTCCGTGCTG
CGCACCCTGC ATCGCATCCA TCGCAACCAC GACATCGGGG TGCTGGTGGT TGACGACTCC
CGCTCGGCGC GGGCCTATCT GGTCCACCTC CTCGGCCGCT GGGGGTTCTG TTGCTACGAG
GCCGGCGACG GCGAGCAGGC GCTGCAGCAG ATCGACGCCG AGACCGACAC CCCCATCCGG
CTGGTCCTCT GCGACCAGAA CATGCCGGGG ATGGACGGCA TCACCCTGAT CCGGGAGCTG
CGCCGTCGAC ACACCACGCA ACGGCTAGGG ATCATCGGGG TCTCCAGTCA CGGCTCCGGG
CTGCTCTCCG CGCGGCTGCT CAAGGCCGGG GCCGATGACT TCCTGACCCG CCCTTTCCTC
GAAGAGGAGC TCAGTGTCCG CGTCAATCAG AACGTGGACC TCATGGAACT GCTGCGCGAG
GCCCGGGAAG GGGCCCGGCG GGATCCGCTG ACCGGGTTGC ACAACCGGCT CTACCTCGAC
GAGATCGCTG AGCAGCTGGG CGAGACGGCG CGGCGCACCC AGCAGCCGCT GGGGGCGCTG
GTGGTGGACC TCGACCACTT CAAGTCGATC AACGACCGCC TGGGCCACTT CGGCGGTGAC
ACGGTGCTCA AGCGGGTCGC TGACCAGCTG CGCGATACCG TCCGGCGTGC CGACGTGCTG
GTCCGTTCTG GGGGCGAGGA GTTCTACATC CTCACCCTGG GGATCGATAC GGCCGGTGCC
CGAACCCTAG GCGAACGGAT TCGCAACGGC ATCGAGACGC TGGAGCTGGT CTATGAGGGC
GAGACCATCA CGACCAGTGC CAGCGTCGGG GTGGCCGTGC TCGAGGGCGG CTCGGTGGAG
GAGGCTCTGA AAGCCGCCGA TCTGGCCATG TACGAGGCCA AGCGCCAGGG GCGCAACCGC
GTCGCGGTCC TGCCTGAGAC GGATTGA
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| Protein sequence | MVEEQRVADC VLVVEDSRAV AGWLAGRIED ALGLRALVAG SRAAAREWLH THAERISAAV
LDLDLPDAPH GEVAGDLVER QIPSVVLTAT IEDDLRDQLV AAGVCDYVLK DAPDAIDSVL
RTLHRIHRNH DIGVLVVDDS RSARAYLVHL LGRWGFCCYE AGDGEQALQQ IDAETDTPIR
LVLCDQNMPG MDGITLIREL RRRHTTQRLG IIGVSSHGSG LLSARLLKAG ADDFLTRPFL
EEELSVRVNQ NVDLMELLRE AREGARRDPL TGLHNRLYLD EIAEQLGETA RRTQQPLGAL
VVDLDHFKSI NDRLGHFGGD TVLKRVADQL RDTVRRADVL VRSGGEEFYI LTLGIDTAGA
RTLGERIRNG IETLELVYEG ETITTSASVG VAVLEGGSVE EALKAADLAM YEAKRQGRNR
VAVLPETD
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