Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00466 |
Symbol | |
ID | 6305387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1930019 |
End bp | 1931263 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639156 |
Product | Putative two-component system regulatory protein with GGDEF domain |
Protein accession | YP_001913029 |
Protein GI | 188576100 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.6149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGTTGG TGGAGAATTC GCGCACGTTC ACCAGCATGC TGCGCGAAGC CATCGAGCAA CGCGTGGAAC TTTCAGTCAC CGTCGTGTCG ACCCTGGCCG AAGCTGCGCG TGTGCTTGAC GAAGAGGATG GCTGGTTTCT GGTCCTGACC GGCCTGGTGC TGGTCGACGG CGACCGCGAC AAGGTCGTGG AATTCTTTCT CTCGCGCAAA CTGCCCACCG TGGTGGTCAG CGGCGTGTAC GACGAAGACC TGCGTCAGCG CGTGCTACAG CAGCAGATCA TCGATTACGT ACTGAAAAAC GCACCGGGCA GCATCGAATA CCTGGCCTGG CTGGTACAGC GTTTGGAGCG CAATCGCCGG ATCGCCGCCC TGGTGGTGGA CGATTCGCTG TCGGCACGCA CCTATGCCGG CGCGCTGCTG TCGATGTACG GCTACCGCGT GGTGCTGGCA GCCGACGGCC CTGCCGGGCT GGAAGCAATC GAACGCGACC CGAGCATTCG CCTGACCATC GTCGACCAGG AAATGCCTGG CATGGATGGC GTGGAATTTA CCCGCCGGCT ACGTGCGATC CGCTCGCGCG ACAAGGTGGC GCTGATCGGT ATTTCCGGTA ACAGCGATTC GTCGCTGATC CCGCGCTTTT TGAAGAACGG CGCCAACGAT TTCCTGCGCA AGCCGTTTTC GCGCGAAGAA TTCTTCTGCC GCGTGTCGCA GAACGTGGAC CAGCTGGAAC TGATTGGCAC CCTGCAGGAT CTGGCTACCC GCGACTTCCT CACCGGCTTA CCCAACCGGC GTTACTTTCT GGAACAAAGC CAGCGTGTCA TTACGAAACT GTTGTCGCAG GACCAGACGG TGACTGCGGC GATGGTGGAT ATCGATCACT TCAAACACAT CAACGACACC TGGGGCCACG ACGTTGGCGA CCAAGCGCTG CGTGCGGTGG CCGCTTCGGT CTCCGGGCAT GCCCGGCCGC AGGACCTGGT GGCGCGCTTC GGCGGCGAAG AATTCTGTCT GCTGGTGCCC GGCCTGGATG CGGCCAACGC CACCAGCTAT TTCGAGACGT TGCGCGAACG CATCAGCGCG CTGCGCGTGC GCGTGGGCGA AGAGACGCTC AGCATGACGG TCAGCATCGG CGTGTGCATC GCCAGCGAAA GCGACCAGTC GCTGCATTAC CTGTTGAACG AAGCAGACAA GTACCTGTAT CTGGCCAAGG CCGGCGGCCG TAACCAGGTG CGTCTGGCAG GCTGA
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Protein sequence | MLLVENSRTF TSMLREAIEQ RVELSVTVVS TLAEAARVLD EEDGWFLVLT GLVLVDGDRD KVVEFFLSRK LPTVVVSGVY DEDLRQRVLQ QQIIDYVLKN APGSIEYLAW LVQRLERNRR IAALVVDDSL SARTYAGALL SMYGYRVVLA ADGPAGLEAI ERDPSIRLTI VDQEMPGMDG VEFTRRLRAI RSRDKVALIG ISGNSDSSLI PRFLKNGAND FLRKPFSREE FFCRVSQNVD QLELIGTLQD LATRDFLTGL PNRRYFLEQS QRVITKLLSQ DQTVTAAMVD IDHFKHINDT WGHDVGDQAL RAVAASVSGH ARPQDLVARF GGEEFCLLVP GLDAANATSY FETLRERISA LRVRVGEETL SMTVSIGVCI ASESDQSLHY LLNEADKYLY LAKAGGRNQV RLAG
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