| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0563 |
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| Symbol | |
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| ID | 1044352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 654985 |
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| End bp | 656340 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143946 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | NP_742726 |
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| Protein GI | 26987301 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CAGTCGAGCC GAGCCCGCAG TGCCCCGTCC AACAGTTGAC GCGTAACGGC
CTGCGCAAGG ACGACCCGCT CGACCAACTG CTGCTGCCCG TGCGCAAACC GGTGTACATC
CTGCTGCAGG ACCACGAGCG CGCCCAGCGC CTGGCCCAGC AACTGGAATT CTTTGGTCTG
GTGGTGCAGG CGTTGCCCAG CGCCGCAGCG TTTCTCGCCT CGATCAGCGA GTACCCGCCG
TCGGCCATCA TCATGGATGT CGACTTCACC GGCGCCGGCC TGGGCTTGCT GCTGGCCGCT
CAGGTGCAGC AGGGCCTGGC ACGCTCCATT CCGTTGCTGT TCTTCAGCCA TCACGAAGCC
GACACCCCTA CCCGCCTTGC CGCAGTGCGC GCCGGCGGTC AGGACTTTCT CACCGGCAGT
CTGGAAGCTT CCAGCCTGCT GGAAAAGGTC GAACTGCTGA CCAACACCGC CCCTCACGAC
CCGTTGCGCG TGCTGATCAT CGACGATTCG CGCACACAGG CCATGTACAC CGAGCGTGTA
CTGGCCGGCG CCGGCATGCT CACCCGCAGC CTGACCGACC CGATCCGCAC CATGGCCGAG
CTTGCCGACT TCCAGCCCGA CCTGATCATC CTCGACCTGT ACATGCCGGC CTGCACCGGC
CCGGAGCTGG CCAAGGTAAT CCGCCACAGT GACCGTTATG TGAGTGTGCC GATCATCTAC
CTGTCTGCCG AGGACGACCT GGACAAGCAA CTGGATGCCA TGAGCGAAGG CGGTGATGAC
TTTTTGACCA AGCCGTTTCG CTCACGCCAC CTGATCACTA CCGTGCGCAA CCGCGCCGCC
CGCGCCCGCC ATTTGAAGGC ACGCATGGTC CGCGACAGCC TGACCGGGCT GTACAACCAC
ACTCATATCC TGCAGCTGCT GGAAGACTGC AGCTTCCGCG CCCGCCGTGA GCAGCAGCCG
TTGAGCTTTG CCATGCTCGA CATCGACCAC TTCAAGAAGA TCAACGACCG CCACGGCCAC
CCCATGGGCG ACCGAGTGAT CAAGAGCCTT GCCCTGTTCC TCAAGCAGCG CTTGCGCAAG
ACCGACTTCA TTGGCCGCTA CGGTGGCGAG GAGTTCGCCA TCGTCATGCC CAATACCGCG
CTGGATGCCG CACACAAGGT GCTGGACGAA ATTCGCCGGC GCTTTGCCGA AATTCTCTAC
CCGGCGCAGC CGCGGGATTT GCAGTGCACC TTCAGTGCCG GGGTGGTGCA ACTGGACGAG
GGGCTGGATG CACTGACCAT GGCCAGTGCA GCGGACGAGG CGCTGTACCG GGCCAAGCAT
GCAGGGCGCA ATTGCGTCGT TCGTGTAGAG CCCTGA
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| Protein sequence | MSQAVEPSPQ CPVQQLTRNG LRKDDPLDQL LLPVRKPVYI LLQDHERAQR LAQQLEFFGL
VVQALPSAAA FLASISEYPP SAIIMDVDFT GAGLGLLLAA QVQQGLARSI PLLFFSHHEA
DTPTRLAAVR AGGQDFLTGS LEASSLLEKV ELLTNTAPHD PLRVLIIDDS RTQAMYTERV
LAGAGMLTRS LTDPIRTMAE LADFQPDLII LDLYMPACTG PELAKVIRHS DRYVSVPIIY
LSAEDDLDKQ LDAMSEGGDD FLTKPFRSRH LITTVRNRAA RARHLKARMV RDSLTGLYNH
THILQLLEDC SFRARREQQP LSFAMLDIDH FKKINDRHGH PMGDRVIKSL ALFLKQRLRK
TDFIGRYGGE EFAIVMPNTA LDAAHKVLDE IRRRFAEILY PAQPRDLQCT FSAGVVQLDE
GLDALTMASA ADEALYRAKH AGRNCVVRVE P
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