Gene Ava_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3170 
Symbol 
ID3680726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3935211 
End bp3936245 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content42% 
IMG OID637718519 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_323673 
Protein GI75909377 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.103544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGCA TAAGCCCATA TTCTCTTTCT AAAAAACCTC CCTTAATTTT GGTGGCTGAT 
GATGACAAGA CCATCCGAAT GCTGTTGCGT GAAGCTATGG AAAAAGAAGG CTATCGAGTA
GTAGAGGTCA CAGATGGTAA ACAGTGTCTA GACGCTTATG AGGCTGTTAA ACCAGATATA
GTGTTGCTAG ATGCTATGAT GCCTGTAATG GACGGTTTTA CGTGCTGTAA ACAATTACTA
CAAATTGCCA GAAATAATCT AATTACCGCA TTGGCAAATC TAGATACTGA TTCCGGCTTA
GGAAGTACGG TGATCTCCAG ATTGTGGGAA CGTACACCTA TCCTGATGAT CACTAGTTTA
AACGATGCAG AGTCCGTAGA TCGTGCTTTT GAAGCTGGCG CAACTGACTA TATTACTAAG
CCAATTCACT GGGCTGTGTT GCGTCAACGC TTACGAAGAT TACTACAGCA AGCACAAGTG
TATAAACAGT TAGAAGCTGC GAACATGGCC TTACAGCACT TAGCCAATGT GGATGGTTTA
ACTGGATTAG CTAATCGCCG CCGCTTTGAT AATTATTTAA ATACGCAGTG GATTAACTTG
GTACAGAAAG GCGCTCCCTT GTCTTTGATT TTGTGTGATA TTGATTATTT TAAATTTTAT
AATGACCAGT ACGGACATCC GGCTGGGGAT ATTTGTTTAC AAAAAGTAGG TGCGGTTTTA
AGCTACAAAG CTCAGAAGCA TCAGGATTTA GTTGCCCGTT ATGGTGGCGA AGAATTTGCC
GTGATTATGC CATATACTCA TGCAAAAGGA GCGATTTATG TTGCCCATAC CATACAAACC
AGTGTCAGAG ATTTGCAAAT TACCCATGAT AAATCTGCTG TGAGTCAACA TATTACTCTC
AGTATGGGTG TTGCTACCAT AACTCCTACC TGGGAATCTT CACCTTCTGA TTTGATTGCG
GCGGCGGATA AAGCACTTTA TAAAGCGAAG GAATCAGGAC GAGACCGTAT TTGTCAATGG
AAAGGTAGTC AATAG
 
Protein sequence
MSGISPYSLS KKPPLILVAD DDKTIRMLLR EAMEKEGYRV VEVTDGKQCL DAYEAVKPDI 
VLLDAMMPVM DGFTCCKQLL QIARNNLITA LANLDTDSGL GSTVISRLWE RTPILMITSL
NDAESVDRAF EAGATDYITK PIHWAVLRQR LRRLLQQAQV YKQLEAANMA LQHLANVDGL
TGLANRRRFD NYLNTQWINL VQKGAPLSLI LCDIDYFKFY NDQYGHPAGD ICLQKVGAVL
SYKAQKHQDL VARYGGEEFA VIMPYTHAKG AIYVAHTIQT SVRDLQITHD KSAVSQHITL
SMGVATITPT WESSPSDLIA AADKALYKAK ESGRDRICQW KGSQ