| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3967 |
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| Symbol | |
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| ID | 4040825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 529677 |
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| End bp | 530684 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979391 |
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| Product | putative response regulator of a two-component system |
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| Protein accession | YP_586104 |
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| Protein GI | 94312895 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000645274 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0110626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGAC AACTCAATTC GGCCGATGCG GCGGCCACCC ATGAATACCC GGCAATGGTG
CTGCTGGTCG ACGACCAGGC CATCATCGGC GAGGCTATCC GGCGTGCGCT GGCCAGCGAG
TCCGATATCG ACTTCCACTA TTGCTCGCAG CCCGAAGAGG CCGTGACGGT GGCCGAGCGC
ACCAAGCCCA CCGTGATCTT GCAGGATCTG GTCATGCCCG GCACCGACGG GCTGACGTTG
GTGCGCCGCT ACCGCGAAAA CGCCACCACG CGCGATATTC CGATCATCGT GCTGTCGACG
AAGGAAGAGC CCACCATGAA GAGCGCGGCT TTCGCGGCCG GCGCCAACGA CTATCTGGTG
AAGCTTCCGG ATTCGATCGA GTTGATCGCG CGAATCCGCT ACCACTCTCG CTCTTACCTG
AATCTGCTGC AACGTGACGA GGCATATCGG GCGCTGCGCC AAAGCCAGCA GCAATTGCTT
GAGACCAATC TCGAACTGCA GCGGCTAACC AATTCCGACG GACTGACCTC CCTGTCGAAC
CGTCGCTACT TCGACGAGTA CCTGGGCGCG GAATGGAAAC GCGCCCAGCG CGAACAGACC
CAGCTCGCGC TACTGATGAT CGACGTCGAT GCATTCAAGG GCTACAACGA TACCTACGGC
CACGTGGCGG GCGACGAGGT ACTGCGCCGC GTGGCCGCCG TGATCCGCGA GAACTGCGCA
CGCCCGGCGG ACCTGCCCGC GCGCTTCGGC GGTGAGGAAT TCTCGATGAT CCTGCCGGCC
ACATCGCCCG GCGGCGCACG ACTGCTGGCC GAGAAGGTCA GGCGCGCGAT CGAGACGCTG
CGCATTCCGC ATGCCTGCTC CCCAACTGGC GGATTTGTCA CGGTCAGTAT CGGCGGCGCG
GTGATAGTGC CGGGAGGCGA TGCCGATTTC AGCCGGCTGA TAGAGGCTGC CGATGCTGGC
CTCTATCAGG CCAAGCGTAA TGGACGAAAC CAGGTAGTGA TGGCGTAG
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| Protein sequence | MPRQLNSADA AATHEYPAMV LLVDDQAIIG EAIRRALASE SDIDFHYCSQ PEEAVTVAER
TKPTVILQDL VMPGTDGLTL VRRYRENATT RDIPIIVLST KEEPTMKSAA FAAGANDYLV
KLPDSIELIA RIRYHSRSYL NLLQRDEAYR ALRQSQQQLL ETNLELQRLT NSDGLTSLSN
RRYFDEYLGA EWKRAQREQT QLALLMIDVD AFKGYNDTYG HVAGDEVLRR VAAVIRENCA
RPADLPARFG GEEFSMILPA TSPGGARLLA EKVRRAIETL RIPHACSPTG GFVTVSIGGA
VIVPGGDADF SRLIEAADAG LYQAKRNGRN QVVMA
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