Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1511 |
Symbol | |
ID | 4603763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1834784 |
End bp | 1836034 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780861 |
Product | response regulator receiver protein |
Protein accession | YP_927388 |
Protein GI | 119774648 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGATTC TGGTGGTAGA AGACAGCAGC GTGGCAGCAC GCATCCTCAA ACATATGCTG ACCCATCAGC TCGAGTGCAG CATTGATGTT GCGCCGGACT TGGCCAGCGC CGCGGCCCTG CTGGCCAAGC ACGACTATTT TGTGGCGATA TGCGATCTCA ACCTGCCCGA TGCTCCCGGC GGGGAGAGTG TCGAGCTGGT GCTTGGCAAT CAGACGCCCT GTATCGTGCT GACCGGCAGC CTGGATGCAC AGCAGCGCCG CCGTTTACTG CAAATGGGCA TAGTGGATTA TGTCTACAAG GAAAACCGTT ACAGTTACGA GTACGTAGTC AAACTTATCG CCACCCTTGC TCGCAACCGC CACACCAAGG TGTTGGTGGC CGACGATTCG GCCCTCAGTC GCAAATTTGT CCGTAATCTG TTGGAGCTGC ATCTTTTTGA AGTGATCGAA GCCGAAAACG GCGCCAGGGC ATTGGAGCTG CTTGACGCCG TGTCCGGCAT TCGCCTGCTT ATTGCCGATT ACAATATGCC GGGTATCGAT GGATTTGAAC TTATCTTAAG AGCCCGTGAA AAATTCAGCC GTGAGGAAAT GGCGATTATC GGTCTTTCAA ACGACACTGA CGAAACCCTC ACGGCACGTT TTATTAAAAA CGGTGCCAAT GACTTTTTGC AAAAGCCCTT TGTACACGAA GAGTTTCACT GCCGCGTGAG CAACACCCTT GAATCCCTTG AGATGGTCAG GCAGCTCTGG GAGCAGGCCA ATTTGGATTA CCTTACCTCG GTGTATAACC GCCGTTTTTT CTTCAATCGC TTCAGTCAGC AGGTGCCTGT ACTGGGGCAG CAGGGAGCGA GTTTTTCGCT CGCTGTGCTG GATATCGATT TTTTTAAAGA CGTCAATGAC AAGCATGGCC ATGATGTCGG CGATTTTGTA CTCACGGAGT TTGCTTCGCG CTTGAAACAG TCGCTTGGGC AGCATTTTAC CGTTGCCCGT TTTGGTGGCG AGGAGTTTGT TGTGGCCTTG AAAGGACTGG ATGGCAAGCG CGCTCTGGCG CTGATGGAAG GTTTTCGTGA ACGCCTGGCG ATGGAGCCAT TTGTGTTTGG CGAACTCGAA CTGAGATTGA CCGCAAGCAT TGGCATTGTA GCGCTCGGGC ATGACAGCGA AGAGACTCTG GACAGCCTGA TAAAACAAGC CGATGTGGCA CTCTATCAGG CCAAAACAAA CGGGCGTAAT CGCTGCGTGC TGGCCGAGTA A
|
Protein sequence | MRILVVEDSS VAARILKHML THQLECSIDV APDLASAAAL LAKHDYFVAI CDLNLPDAPG GESVELVLGN QTPCIVLTGS LDAQQRRRLL QMGIVDYVYK ENRYSYEYVV KLIATLARNR HTKVLVADDS ALSRKFVRNL LELHLFEVIE AENGARALEL LDAVSGIRLL IADYNMPGID GFELILRARE KFSREEMAII GLSNDTDETL TARFIKNGAN DFLQKPFVHE EFHCRVSNTL ESLEMVRQLW EQANLDYLTS VYNRRFFFNR FSQQVPVLGQ QGASFSLAVL DIDFFKDVND KHGHDVGDFV LTEFASRLKQ SLGQHFTVAR FGGEEFVVAL KGLDGKRALA LMEGFRERLA MEPFVFGELE LRLTASIGIV ALGHDSEETL DSLIKQADVA LYQAKTNGRN RCVLAE
|
| |