Gene MADE_02505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02505 
Symbol 
ID6777256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2722596 
End bp2723516 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content44% 
IMG OID642755944 
Productputative response regulator 
Protein accessionYP_002126795 
Protein GI196157306 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGAA TGGAAATAAA ACCCTACTCA GCGTGCCGGG TACTAATTGT TGACGATGAA 
CCGATGAGTC GGTTGTTGTT GGAGTCAATA CTAGAAAGCG TTTTTCATTG CACTGTAGTG
GAATCCGGTA AAGACGCTAT ATCTAACTGC GAGGAGTGTT TGCCTGACTT AGTGTTACTC
GACATGAATA TGCCAGACAT AAATGGGCTC GAAGTATGTG CAACGCTCAA AGCATCCCCG
ACGACAAGCC AAATACCGGT AATATTCGTT ACCTCAACGA TGGACATTGA AAGTGAAAAT
GCATGCTGGG AGGTTGGAGC GTCTGACTTC GTTATGAAGC CAGTAAACGC CTCTACTTTA
ACGCACCGAG TCAAAACCCA CCTCCAAAAT AAGCTTCGTA CTGAGTTTTT AGAAATGATG
ACATTTCATG ATCAGTTAAC GGGCCTGTAC AACCGCATGT ATCTGACCAA AGAAATCCCT
CTGCTAATAA AACAAGTAGC GCGAGATAAA GGAATGGTTG GCGCGATAAT GATTGATATC
GACTATTTCA AGCTTTTTAA CGACCATTAC GGGCATTTAG AAGGCGATAA TTGCCTTAAG
AAGGTTGCGC AGATTATTGC AGACACCGTT AAACGGCCCA AAGATGCAGT GATCCGTTTT
GGCGGTGAAG AATTCTTGGT AATTCTTCCC TACATCGATT ATCAGGGAAT AAAGCTCGTT
GCCAACCAAC TCGTGAAAGC GGTGAGACAA GCAGGTATTG TGCACGAAAA AGGGATTAGC
GGCTATGTAT CAATTAGCGC TGGATATGCC GTATGGAAGG CAGCAGACGT TGTAGACGAA
GATTCAGCTT CACTTATCGA AGACGCAGAT ATTTCCCTTT TTGAGGCCAA AGAGCGAGGG
CGAAATCAAG CGAAAGGCTA A
 
Protein sequence
MNGMEIKPYS ACRVLIVDDE PMSRLLLESI LESVFHCTVV ESGKDAISNC EECLPDLVLL 
DMNMPDINGL EVCATLKASP TTSQIPVIFV TSTMDIESEN ACWEVGASDF VMKPVNASTL
THRVKTHLQN KLRTEFLEMM TFHDQLTGLY NRMYLTKEIP LLIKQVARDK GMVGAIMIDI
DYFKLFNDHY GHLEGDNCLK KVAQIIADTV KRPKDAVIRF GGEEFLVILP YIDYQGIKLV
ANQLVKAVRQ AGIVHEKGIS GYVSISAGYA VWKAADVVDE DSASLIEDAD ISLFEAKERG
RNQAKG