| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1830 |
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| Symbol | |
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| ID | 7267742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 2243959 |
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| End bp | 2246784 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643566668 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_002463163 |
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| Protein GI | 219848730 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC ATACCAGCGC GGCACACATC TTATTTACCG AACTTCAGCA GCAATATCTT
GCTCAACTGG AAGAGAAGAC TAACCGCATC ACGACCATCT GGACACGGTT GCAATCCGGT
ACGTATGACC GGGACGATCT GCGTGAGTTG CAACGGTTAG CGCATAATCT TGCCGGTTCC
GGTGCCACAT TTGGGTTGAC GGCGGTTAGT GAAACAGCCC GCGCCCTCGA TATTGCCTTG
CAACCCTTGA TCAGTACTGA TGAATTGCCT GCTGACTTCT CATCGATCGC CGGTCTCGTT
GCTCAATTGC TAGAGACACT CCGCAACCCG CCGTCGGTAC TGACCACGGT AATTCAAGAG
CAGCCGGTCA CGACCACAAC GTTAATCTAT CTCGCCGGTC ATAACCTCGA AGAGACGACC
GAACTTGCCC GTCAGATCAC CTATTTCGGC TATAAGACTG AATACTTTAC CAGCAGTGCT
GCATTATTAG CAGCAATCGC GCGTGAGGCG CCACAATTAG TAATTATCGA TCTGCATCTA
GCCGAGGGAC CGCAGAGCGG GATTGCCGCA GCCGCCGTCG TGCATGATCG GTATGGGGAT
CGCATACCGA TCATCTTTAC CGCAAGCAGT GCCGATTTTA CCCTACGGCT GGCCGCCGTG
CGTGCCGGAG GGCGCGGATA TTTTACGCGC CCTATTGATC TTGGGGTATT GATCGACCAG
ATCGATCAGA TGACTCAACG CACGATTAGC GAACCGTACA CGGTGCTGAT CGTCGATGAC
TCGCCGCTGA TGGCTGAAGT ATACGCACTG GCGTTACGGG CTGCCGGTAT GCAAGTGATC
GCAACGACCG ACCCACTGGA AGCGCCGACG TTGCTGGCCG AGCAGCAACC TGATCTGATC
TTACTCGATG TCTACATGCC GGGCTGTAGT GGGCAAGAGT TAGCCGCTGT GATTCGTCAA
CAACCGGAAT ACCACAGTAT CCCGATCGTG TTCTTGTCGG GTGAAACCGA CCGTTCGGCG
CAGTTGGCCG CGTTGGCGCG TGGCGGCGAT GACTTCCTCA CCAAACCGAT TAATCTCGAA
CACCTGGTAG CCGCAGTGAG TTCTCGCATT CAGCGCGCCC GCGCCATTCG GAGCCTGATG
GTACGTGACG GCTTGACCGG CTTGTTTAAC CACAGCGTGT CGCAGGATCT CTTGACGCGA
GAAGTAGCGC GCGCACGGCG GAATGGGCAA CCGTTATCGG TCGTGTTAAT CGATATTGAC
CATTTTAAAC AAGTGAACGA TCGCCATGGC CACCAAATGG GTGACCGCGT CCTGAAAAGT
CTGGCCCGTC TTCTCCGTCA ACGTTTACGG ACAACCGACG TGATTGGGCG CTACGGCGGT
GAAGAGTTTT TGGTTGTCAT GCCCGACACG CGCGCTGCGA GCGCAGCGAT GGTGATCGAT
AGCCTACGCG AACGATTTGC CCATATCGAG CACCAGCGCG AAGGTGAGCC GTTGCGTGTC
ACCTTCTCTG CCGGCGTTGC CGAGTGGAGT TTGGGGATGG ACACCGGTTC GTTGCTGGAA
AAAGCCGATG CAGCATTGTA TCAGGCTAAA AACCAAGGTC GTAATCTCGT TGTGATTGCC
GATACACACT CGATGCATGT GCCGCAACGC CGTACTCTGC CACCATCACC GAGCCGAACT
CATCAGGCGC CGGTCGTTTT GGTGGTGGAC GACGACCCGA ACATTTGTCG CTTGCTCCAA
ATTTGGTTGG TTGATGCGGG CTACCGGGTG GAGATAGCGC AGAGCGGTTT CGAGGCTTTG
CAGCGCATTG CCCAAGGTGG AATTGATGTT GCCTTAATTG ACATTCTGAT GCCGGAACTG
AGTGGGATTG ATGTCCTCGA TCAGGTACGT CGGGCCGGTC CAGAACCGGC GGTGATAATG
ACGACGGCCT TCGGTTCGGA ACAGATCGCG GTGAATGCGA TTCGTCACGG TGCCGACGAT
TACCTGCGCA AACCGATTGA TCGGCAAGAG CTACTGGTCG TTCTGGAACG GACCCTCACG
AATCTACGTC TCCAACGGGA AAATGCAGCG TTACAACGCC GGTTGGAGCA GAAACGTCGT
GAGCTAGAAG CCGAGATCAA GCACGCTGCC CAGATCCAGG CCGAAATGCT GCCGCAGCAA
ATGCCTCGCT TACCGGGATA CACCATTGCC GCTCGGTGCA TTCCGGCTCG TGATGTGGGT
GGCGATTTCT ACGATTGGCA CTTCCCCGCT CCACACCTGC TTAATCTGAC CTTTGGTGAT
GTGATGGGCA AAGGGATGTC GGCGGCACTG TTAATGACAA CCACCCGCGC CGTCATCCGT
TCGGTGGCGC GGGAAACACC GCCAGAAGTA AATATGCGGT ATGCCGTCAA TGCCCTCTAC
GCCGATCTGG ACCGGACGAG TAGTTTTGTC ACCCTGTGCC ATTCGCAGTT GAATCTGAAC
ACACACACCC TGGCATTTGT CGATGCCGGT CACGGGCTGG GCTTCATCCG ACGACACGGT
GGAAGATTTG ATCGGCTTGA ACCACGTGGT GCGCCGCTCG GTATCTTTTC GCAAGAACCA
TACCGGCAAG GCGAAACGGT CCTTAATCCG GGTGATGCCT TCATCTTGTT TAGTGATGGT
TTGCTCGATC CGTGGCCGGC ATTGACCAAA GATCCGTTTC TGATCAACGA ACTGCTTGAA
GACGGGATGC GGGCTACGGC GATTGTTGAT CGCCTATTGG CGCTGCCGGC ATTACTTGGT
CCGTTGACCG ACGATTTGAC GGTCGTCGTG TTAGTTCGAG ATTTGACACC TGAGGATAGC
GTATGA
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| Protein sequence | MNTHTSAAHI LFTELQQQYL AQLEEKTNRI TTIWTRLQSG TYDRDDLREL QRLAHNLAGS
GATFGLTAVS ETARALDIAL QPLISTDELP ADFSSIAGLV AQLLETLRNP PSVLTTVIQE
QPVTTTTLIY LAGHNLEETT ELARQITYFG YKTEYFTSSA ALLAAIAREA PQLVIIDLHL
AEGPQSGIAA AAVVHDRYGD RIPIIFTASS ADFTLRLAAV RAGGRGYFTR PIDLGVLIDQ
IDQMTQRTIS EPYTVLIVDD SPLMAEVYAL ALRAAGMQVI ATTDPLEAPT LLAEQQPDLI
LLDVYMPGCS GQELAAVIRQ QPEYHSIPIV FLSGETDRSA QLAALARGGD DFLTKPINLE
HLVAAVSSRI QRARAIRSLM VRDGLTGLFN HSVSQDLLTR EVARARRNGQ PLSVVLIDID
HFKQVNDRHG HQMGDRVLKS LARLLRQRLR TTDVIGRYGG EEFLVVMPDT RAASAAMVID
SLRERFAHIE HQREGEPLRV TFSAGVAEWS LGMDTGSLLE KADAALYQAK NQGRNLVVIA
DTHSMHVPQR RTLPPSPSRT HQAPVVLVVD DDPNICRLLQ IWLVDAGYRV EIAQSGFEAL
QRIAQGGIDV ALIDILMPEL SGIDVLDQVR RAGPEPAVIM TTAFGSEQIA VNAIRHGADD
YLRKPIDRQE LLVVLERTLT NLRLQRENAA LQRRLEQKRR ELEAEIKHAA QIQAEMLPQQ
MPRLPGYTIA ARCIPARDVG GDFYDWHFPA PHLLNLTFGD VMGKGMSAAL LMTTTRAVIR
SVARETPPEV NMRYAVNALY ADLDRTSSFV TLCHSQLNLN THTLAFVDAG HGLGFIRRHG
GRFDRLEPRG APLGIFSQEP YRQGETVLNP GDAFILFSDG LLDPWPALTK DPFLINELLE
DGMRATAIVD RLLALPALLG PLTDDLTVVV LVRDLTPEDS V
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