| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4602 |
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| Symbol | |
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| ID | 6113583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5083169 |
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| End bp | 5084548 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624408 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001751451 |
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| Protein GI | 170723763 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.195913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CCGCGGAGCC GAGCCAAGAG CGCCTCAAGC AGGAGCTCGA TCACCTGCTG
CAACGCCTGT CGCGCACTCG TTTGCGCAAG GGCGACCAAC TTGATCAGCT GACGTTGCCA
CCTGCCCGCA GGCCGGTGTA TCTGCTGCTG CGCGACCATG AGCGTGCCGA GCGTCTGGCC
CAGCAGCTGG AATTCTTCGG CCTGAGCGTG CAACCGCTGT TCAGCGTCGA CGCGTTGCTG
GCGTCAGTGG CCGAGCAGGC ACCATCCGCC ATAGTCATGG ATGTCGACTT CAGCGGGCCG
GGATGCGGCA TGCAACTGGC GGCACAGGCG CAGTCGGGTC TGGAGCAGCC GATCCCGCTG
TTGTTCTTCA GCTTGCACGA AGCCGACACG CCAACGCGCC TGGCCGCAGT ACGCGCAGGT
GGTCAAGCAT TTCTCACCGG CACACTGGAA GCCTCCAGCC TGCTTGAGAA GCTCGAGATC
ATGACCAGCA CCGTGCCTCT TGAACCGCTG CGCGTGCTGA TTATCGACGA CTCGCGCACC
CAGGCACTGC ACACCGAACG CGTGCTGGGC AGCGCCGGCA TGATCACCCG CAGCCTGACC
GACCCGATCC GCGCCATGGC CGAGTTGGCC GACTTCCAGC CCGACCTGAT CATTCTCGAC
CTGTACATGC CAGCCTGCTC GGGCCCGGAA CTGGCCAAGG TGATCCGCCA CAACGACCGC
TACGTCAGCG TACCCATCAT CTACCTGTCC GCGGAGGACG ACCTGGACAA ACAGCTCGAT
GCCATGAGCG AGGGCGGCGA CGACTTTCTG ACCAAACCTA TCCGCTCGCG ACACCTGATC
ACCACTGTGC GCAACCGCGC TGCCCGTGCG CGCCACCTCA GGTCGCGCAT GGTCCGCGAC
AGCCTTACCG GCCTGTACAA CCACACGCAC ATCCTGCAAC TGCTGGAAGA CTGTAGCTTT
CGCGCCCGTC GCGAGGGCCA GCCGCTCAGC TTCGCCATGC TCGACATCGA CCACTTCAAG
AAGATCAACG ACCGCCATGG CCACCCCATG GGCGACCGGG TCATCAAGAG CCTGGCACTG
TTTCTCAAGC AACGGCTGCG CAAGACCGAC TTCATCGGCC GCTATGGCGG CGAGGAATTC
GCCATCGTCA TGCCCAACAC CGCACTGGAT GCCGCGCACA AGGTGCTCGA CGAGATTCGC
CGGCGCTTCG CCGAAATCCT ATACCCGGCA CAACCCTGCG ACCTGCAGTG CACTTTCAGT
GCCGGGGTAG TGCAGCTGGA CGATGAGCTC GATGCGTTGA GCATGGCCAG CACCGCAGAT
GAGGCGCTGT ATCGGGCCAA GCATGCGGGA CGCAACTGTG TGGTGCGGGT CGAGCCTTAG
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| Protein sequence | MTQAAEPSQE RLKQELDHLL QRLSRTRLRK GDQLDQLTLP PARRPVYLLL RDHERAERLA
QQLEFFGLSV QPLFSVDALL ASVAEQAPSA IVMDVDFSGP GCGMQLAAQA QSGLEQPIPL
LFFSLHEADT PTRLAAVRAG GQAFLTGTLE ASSLLEKLEI MTSTVPLEPL RVLIIDDSRT
QALHTERVLG SAGMITRSLT DPIRAMAELA DFQPDLIILD LYMPACSGPE LAKVIRHNDR
YVSVPIIYLS AEDDLDKQLD AMSEGGDDFL TKPIRSRHLI TTVRNRAARA RHLRSRMVRD
SLTGLYNHTH ILQLLEDCSF RARREGQPLS FAMLDIDHFK KINDRHGHPM GDRVIKSLAL
FLKQRLRKTD FIGRYGGEEF AIVMPNTALD AAHKVLDEIR RRFAEILYPA QPCDLQCTFS
AGVVQLDDEL DALSMASTAD EALYRAKHAG RNCVVRVEP
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