| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0623 |
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| Symbol | |
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| ID | 3712380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 732894 |
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| End bp | 734564 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_346356 |
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| Protein GI | 77456851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.322116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CAGAAGACCC CAGCCGTGAG CGCCTCAAGC ACCACTTTGC CCAGCGGGTA
ATTCATCAGG CACGTCAGAT TCTTGAGATA TGGCAGCGCC TGCAACGCAG TGAGTGGTCC
ACTGCCGATC TCGCCGAACT GAGCGAGGCC AATTTGCGCC TGCTGCGTTT TGCCGAGCGT
TTCGAACAGC CCGAACATAC GCAGCTGGCC CGCCACATCA GCCAGTCGCT GGAAGCGGTG
GACGCCAATC GCGGACGCCT GAGCAGCGGC CTGATCACCG ATCTCAACCG CCTGATGCAG
CGCTTGTCGC GCACCGGCCT GCGCCATGGC GATCAGCTTG ATCAGACCTT CCTGCCGCCC
CTGCGCAAAC CGATCTACGT GATGCTGCAG GATCACGACC GCGCCGAGCG GCTGGCCAAG
CAGCTGGAGT TTTTCGGTCT GAGCGCCCAG GCGCTGGACA GCGTGTCGGC GTTTCGCTCG
TCGATGGTCG AGCGCCTGCC GGCCGCGATC GTCATGGACG TGGATTTCAG CGGCGCCGGC
GTCGGCCTGA AACTCGCTGC CGAAGCCCAG CAAGGTCTGG AAGAACCACT GCCGCTGCTG
TTCTTCAGCC TGCACGAAAC CGACACCCCG ACCCGCCTAG CGGCAGTGCG CGCCGGTGGC
CAGGAATTCC TCACCGGCAC CCTCGAAGCG TCGAGCCTGC TGGAGAAGAT CGAAGTCCTG
ACCTGCGTCG CCCAGTACGA ACCCTATAAA GTGCTGATCA TCGACGACTC CCGCGCCCAG
GCCCTGCACA CCGAACGCCT GCTCAACAGC GCCGGGATCG TCACCCGCAC CCTGATCGAA
CCGATTCAAG CGATGGCCGA GCTGGCGGAC TTCCAGCCAG ACCTGATCAT CCTCGACATG
TACATGCCAG CCTGCACCGG CACCGAGCTG GCCAAGGTCA TCCGCCACAA CGACCGCTAC
GTCAGCGTGC CGATCATTTA CCTGTCGGCC GAAGACGACC TGGACAAGCA GCTCGACGCC
ATGAGCGAAG GTGGCGACGA CTTCCTGACC AAACCGATCA AGCCGCGCCA CCTGATCACC
ACCGTGCGCA ACCGCGCCGC CCGCGCGCGC AACCTGAAAG CACGGATGGT CCGCGACAGC
CTCACCGGCC TGTACAACCA CACGCACATT CTGCAATTGC TCGAAGACTG CTCGTTCCGC
GCCCGCCGTG AAAACAAGCC GTTGAGCTTT GCCATGCTCG ACATCGACCA CTTCAAACGG
GTCAATGATA GCCACGGCCA CCCCATGGGC GACCGGGTCA TCAAGAGCCT GGCGCTGTTC
CTCAAGCAGC GTCTGCGCAA GACCGACTTC ATCGGCCGTT ACGGCGGTGA AGAATTCGCC
ATCGTCATGC CGGACACCGA TATAGAAGCG GCGCACAAAG TGCTCGACGA AATCCGCCAG
CGCTTTGCCG AGATCCACTA CCCGGCCCAG CCGCAGGATC TGTGGTGCAC CTTCAGCGCC
GGCGTGGTGG AGATGCACGA CGACTCCGAC AGCCTGATGA TGGCCAGCCA GGCCGACGAG
GCGCTGTATC GCGCCAAGGG CGAAGGACGC AATCGGGTGC AGACCGCTCG CGACTCAAAG
CAAAGTGCCA CTTTTTCATC GGATTCGACC CAATCGGTCA TAACCGTGTA A
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| Protein sequence | MTEPEDPSRE RLKHHFAQRV IHQARQILEI WQRLQRSEWS TADLAELSEA NLRLLRFAER
FEQPEHTQLA RHISQSLEAV DANRGRLSSG LITDLNRLMQ RLSRTGLRHG DQLDQTFLPP
LRKPIYVMLQ DHDRAERLAK QLEFFGLSAQ ALDSVSAFRS SMVERLPAAI VMDVDFSGAG
VGLKLAAEAQ QGLEEPLPLL FFSLHETDTP TRLAAVRAGG QEFLTGTLEA SSLLEKIEVL
TCVAQYEPYK VLIIDDSRAQ ALHTERLLNS AGIVTRTLIE PIQAMAELAD FQPDLIILDM
YMPACTGTEL AKVIRHNDRY VSVPIIYLSA EDDLDKQLDA MSEGGDDFLT KPIKPRHLIT
TVRNRAARAR NLKARMVRDS LTGLYNHTHI LQLLEDCSFR ARRENKPLSF AMLDIDHFKR
VNDSHGHPMG DRVIKSLALF LKQRLRKTDF IGRYGGEEFA IVMPDTDIEA AHKVLDEIRQ
RFAEIHYPAQ PQDLWCTFSA GVVEMHDDSD SLMMASQADE ALYRAKGEGR NRVQTARDSK
QSATFSSDST QSVITV
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