| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1494 |
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| Symbol | |
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| ID | 1045673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1699311 |
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| End bp | 1700318 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144895 |
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| Product | response regulator/GGDEF domain-containing protein |
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| Protein accession | NP_743652 |
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| Protein GI | 26988227 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.799611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATG ATTTACCGAT CGAAGGTTTC GCGACCACCA ACGAAAACTC GGCGATGGTG
CTGCTGGTCG ACGATCAGGC CATGATCGGC GAAGCGGTGC GGCGTGGCTT GGCCAATGAA
GACAACATCG ACTTCCACTT CTGTGCCGAC CCGCACCAGG CGGTGGCCCA GGCCATGCGC
ATCAAGCCCA CGGTCATTCT TCAAGACCTG ATCATGCCTG GGCTGGACGG CTTGACCCTG
GTGCGCGAGT ACCGCAACAA CCCGGTGACC CAGGACATCC CGATCATCGT CCTGTCGACC
AAGGAAGACC CGCTGGTGAA GAGTGCGGCA TTTGCCGCCG GGGCCAACGA TTACCTGGTC
AAGCTGCCTG ACACCATCGA ACTGGTGGCA CGCATCCGTT ATCACTCGCG CTCCTACCTG
ACCCTGCTGC AGCGCGACGA GGCCTACCGT GCCCTGCGCG TCAGCCAGCA GCAGCTGCTT
GATTCCAACC TGATGCTGCA GCGGCTGATG AACTCCGATG GCCTGACCGG GCTGTCCAAC
CGTCGCCACT TTGACGAGTA CCTGGAGCTG GAGTGGCGCC GGGCCATGCG TGAACAGCAG
CAGTTGTCGT TGCTGATGAT CGACGTGGAT TACTTCAAAG TCTACAACGA CAGCTTTGGC
CATCTGGCCG GTGACGAGGC CTTGCGCCAG GTGGCCGAAG CCATCCGTAG CTCGTGCTCG
CGGCCGACCG ACCTGCCGGC GCGCTATGGC GGCGAAGAGT TTGCCCTGGT GCTGCCCAAC
ACCTCGCCAG GCGGGGCGCG GCTGGTGGCC GAAAAACTGC GCCAGACCGT GCTGGGCCTT
GGCATCCCGC ATACTGCGCC GACGGCTGAT ACGTTCTTGA CCGTGAGCAT TGGCCTGGCC
ACCCAGACTC CGGCTATCGG CAGCCATTGC CGGCAGCTGA TTTCGGCGGC CGATAAAGGT
CTGTACCTGG CCAAGAACGG TGGGCGTAAC CAAGTCGGCA TCGCCTGA
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| Protein sequence | MMNDLPIEGF ATTNENSAMV LLVDDQAMIG EAVRRGLANE DNIDFHFCAD PHQAVAQAMR
IKPTVILQDL IMPGLDGLTL VREYRNNPVT QDIPIIVLST KEDPLVKSAA FAAGANDYLV
KLPDTIELVA RIRYHSRSYL TLLQRDEAYR ALRVSQQQLL DSNLMLQRLM NSDGLTGLSN
RRHFDEYLEL EWRRAMREQQ QLSLLMIDVD YFKVYNDSFG HLAGDEALRQ VAEAIRSSCS
RPTDLPARYG GEEFALVLPN TSPGGARLVA EKLRQTVLGL GIPHTAPTAD TFLTVSIGLA
TQTPAIGSHC RQLISAADKG LYLAKNGGRN QVGIA
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