Gene PP_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1494 
Symbol 
ID1045673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1699311 
End bp1700318 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content62% 
IMG OID637144895 
Productresponse regulator/GGDEF domain-containing protein 
Protein accessionNP_743652 
Protein GI26988227 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.799611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATG ATTTACCGAT CGAAGGTTTC GCGACCACCA ACGAAAACTC GGCGATGGTG 
CTGCTGGTCG ACGATCAGGC CATGATCGGC GAAGCGGTGC GGCGTGGCTT GGCCAATGAA
GACAACATCG ACTTCCACTT CTGTGCCGAC CCGCACCAGG CGGTGGCCCA GGCCATGCGC
ATCAAGCCCA CGGTCATTCT TCAAGACCTG ATCATGCCTG GGCTGGACGG CTTGACCCTG
GTGCGCGAGT ACCGCAACAA CCCGGTGACC CAGGACATCC CGATCATCGT CCTGTCGACC
AAGGAAGACC CGCTGGTGAA GAGTGCGGCA TTTGCCGCCG GGGCCAACGA TTACCTGGTC
AAGCTGCCTG ACACCATCGA ACTGGTGGCA CGCATCCGTT ATCACTCGCG CTCCTACCTG
ACCCTGCTGC AGCGCGACGA GGCCTACCGT GCCCTGCGCG TCAGCCAGCA GCAGCTGCTT
GATTCCAACC TGATGCTGCA GCGGCTGATG AACTCCGATG GCCTGACCGG GCTGTCCAAC
CGTCGCCACT TTGACGAGTA CCTGGAGCTG GAGTGGCGCC GGGCCATGCG TGAACAGCAG
CAGTTGTCGT TGCTGATGAT CGACGTGGAT TACTTCAAAG TCTACAACGA CAGCTTTGGC
CATCTGGCCG GTGACGAGGC CTTGCGCCAG GTGGCCGAAG CCATCCGTAG CTCGTGCTCG
CGGCCGACCG ACCTGCCGGC GCGCTATGGC GGCGAAGAGT TTGCCCTGGT GCTGCCCAAC
ACCTCGCCAG GCGGGGCGCG GCTGGTGGCC GAAAAACTGC GCCAGACCGT GCTGGGCCTT
GGCATCCCGC ATACTGCGCC GACGGCTGAT ACGTTCTTGA CCGTGAGCAT TGGCCTGGCC
ACCCAGACTC CGGCTATCGG CAGCCATTGC CGGCAGCTGA TTTCGGCGGC CGATAAAGGT
CTGTACCTGG CCAAGAACGG TGGGCGTAAC CAAGTCGGCA TCGCCTGA
 
Protein sequence
MMNDLPIEGF ATTNENSAMV LLVDDQAMIG EAVRRGLANE DNIDFHFCAD PHQAVAQAMR 
IKPTVILQDL IMPGLDGLTL VREYRNNPVT QDIPIIVLST KEDPLVKSAA FAAGANDYLV
KLPDTIELVA RIRYHSRSYL TLLQRDEAYR ALRVSQQQLL DSNLMLQRLM NSDGLTGLSN
RRHFDEYLEL EWRRAMREQQ QLSLLMIDVD YFKVYNDSFG HLAGDEALRQ VAEAIRSSCS
RPTDLPARYG GEEFALVLPN TSPGGARLVA EKLRQTVLGL GIPHTAPTAD TFLTVSIGLA
TQTPAIGSHC RQLISAADKG LYLAKNGGRN QVGIA