More than 300 homologs were found in PanDaTox collection
for query gene Hneap_1461 on replicon NC_013422
Organism: Halothiobacillus neapolitanus c2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013422  Hneap_1461  putative transcriptional regulator, Crp/Fnr family  100 
 
 
159 aa  325  1.0000000000000001e-88  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1292  cyclic nucleotide-binding domain-containing protein  27.63 
 
 
162 aa  87.8  6e-17  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1527  cyclic nucleotide-binding domain-containing protein  26.76 
 
 
167 aa  76.6  0.0000000000001  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000128576  hitchhiker  0.00383137 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  34.4 
 
 
222 aa  74.3  0.0000000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.36 
 
 
225 aa  70.5  0.000000000009  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  26.95 
 
 
226 aa  68.9  0.00000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  30.95 
 
 
222 aa  68.9  0.00000000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  28.57 
 
 
231 aa  68.6  0.00000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  29.6 
 
 
224 aa  67  0.0000000001  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  29.41 
 
 
228 aa  66.2  0.0000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  29.82 
 
 
225 aa  65.9  0.0000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  27.34 
 
 
223 aa  65.9  0.0000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  29.01 
 
 
246 aa  65.5  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_1117  patatin  31.86 
 
 
621 aa  65.5  0.0000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.142446 
 
 
-
 
NC_009565  TBFG_12585  hypothetical protein  30.23 
 
 
583 aa  64.7  0.0000000004  Mycobacterium tuberculosis F11  Bacteria  normal  0.274213  normal  0.619754 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  25.89 
 
 
243 aa  64.7  0.0000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  30.77 
 
 
226 aa  64.7  0.0000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  28.24 
 
 
263 aa  64.3  0.0000000006  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_010524  Lcho_0179  cyclic nucleotide-binding protein  30.71 
 
 
155 aa  63.9  0.0000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  29.1 
 
 
226 aa  63.9  0.0000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE2616  cyclic nucleotide-binding protein  30.91 
 
 
219 aa  63.5  0.000000001  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  28.57 
 
 
220 aa  63.5  0.000000001  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  27.61 
 
 
225 aa  63.2  0.000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_011831  Cagg_0772  cyclic nucleotide-binding protein  35.38 
 
 
164 aa  63.5  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  33.33 
 
 
220 aa  63.2  0.000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  28.36 
 
 
226 aa  62.8  0.000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.73 
 
 
224 aa  63.2  0.000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.06 
 
 
219 aa  62.4  0.000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  28.33 
 
 
225 aa  62.8  0.000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  29.1 
 
 
224 aa  62  0.000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.41 
 
 
228 aa  61.6  0.000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011894  Mnod_4405  cyclic nucleotide-binding protein  33.56 
 
 
148 aa  61.6  0.000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  27.64 
 
 
227 aa  61.6  0.000000005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_008347  Mmar10_1737  cyclic nucleotide-binding protein  30.39 
 
 
584 aa  61.2  0.000000005  Maricaulis maris MCS10  Bacteria  normal  normal  0.987776 
 
 
-
 
NC_011206  Lferr_1978  cyclic nucleotide-binding protein  27.4 
 
 
164 aa  60.8  0.000000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.569361  normal 
 
 
-
 
NC_011761  AFE_2344  cyclic nucleotide-binding domain protein  27.4 
 
 
164 aa  60.8  0.000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  31.39 
 
 
228 aa  60.8  0.000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  29.41 
 
 
224 aa  60.8  0.000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1374  cyclic nucleotide-binding domain-containing protein  29.06 
 
 
624 aa  60.5  0.000000009  Nitrobacter hamburgensis X14  Bacteria  normal  0.138128  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  25 
 
 
225 aa  59.7  0.00000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  26.61 
 
 
227 aa  60.1  0.00000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_007492  Pfl01_1398  cyclic nucleotide-binding protein  33.04 
 
 
157 aa  60.1  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.908167  normal 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  27.45 
 
 
224 aa  60.1  0.00000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  25.95 
 
 
248 aa  60.1  0.00000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007948  Bpro_0718  cyclic nucleotide-binding  28.39 
 
 
747 aa  59.7  0.00000001  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00567448  normal 
 
 
-
 
NC_008346  Swol_1598  hypothetical protein  27.36 
 
 
407 aa  59.7  0.00000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.303519  n/a   
 
 
-
 
NC_011729  PCC7424_4798  cyclic nucleotide-binding protein  25.81 
 
 
227 aa  58.9  0.00000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  25.83 
 
 
228 aa  59.7  0.00000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  30.58 
 
 
226 aa  59.7  0.00000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  25.95 
 
 
226 aa  59.7  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  28.57 
 
 
224 aa  59.3  0.00000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  25.81 
 
 
230 aa  58.9  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  26.72 
 
 
228 aa  59.3  0.00000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  23.57 
 
 
226 aa  58.9  0.00000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  29.79 
 
 
230 aa  58.9  0.00000003  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_011757  Mchl_3122  cyclic nucleotide-binding protein  31.21 
 
 
149 aa  58.2  0.00000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.196103 
 
 
-
 
NC_008782  Ajs_4137  cyclic nucleotide-binding protein  29.41 
 
 
177 aa  58.5  0.00000004  Acidovorax sp. JS42  Bacteria  normal  normal  0.252066 
 
 
-
 
NC_008009  Acid345_4730  cyclic nucleotide-binding protein  31.13 
 
 
286 aa  58.2  0.00000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.813554  normal  0.722063 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.55 
 
 
243 aa  58.5  0.00000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011992  Dtpsy_3494  cyclic nucleotide-binding protein  29.41 
 
 
173 aa  58.5  0.00000004  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3761  putative Crp/Fnr family transcriptional regulator  25 
 
 
227 aa  57.8  0.00000005  'Nostoc azollae' 0708  Bacteria  normal  0.0509841  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.77 
 
 
236 aa  58.2  0.00000005  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_010172  Mext_2896  cyclic nucleotide-binding  31.16 
 
 
194 aa  58.2  0.00000005  Methylobacterium extorquens PA1  Bacteria  normal  0.633977  normal 
 
 
-
 
NC_009767  Rcas_3910  cyclic nucleotide-binding protein  28.47 
 
 
167 aa  57.8  0.00000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.34683  normal  0.175845 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.77 
 
 
236 aa  57.8  0.00000006  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  28.57 
 
 
225 aa  57.8  0.00000006  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1513  cyclic nucleotide-binding protein  23.77 
 
 
308 aa  57.8  0.00000006  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.00604424  normal 
 
 
-
 
NC_010505  Mrad2831_5013  cyclic nucleotide-binding protein  30.71 
 
 
147 aa  57.4  0.00000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.32822  normal  0.191008 
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  28.57 
 
 
230 aa  57.4  0.00000008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  26.32 
 
 
239 aa  57.4  0.00000008  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  28.57 
 
 
230 aa  57.4  0.00000008  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_011145  AnaeK_2607  cyclic nucleotide-binding protein  31.43 
 
 
215 aa  57.4  0.00000008  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  29.13 
 
 
225 aa  57  0.00000009  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  24.81 
 
 
234 aa  57.4  0.00000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  28.3 
 
 
224 aa  57  0.00000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  29.69 
 
 
228 aa  56.6  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_009720  Xaut_1892  cyclic nucleotide-binding protein  26.81 
 
 
147 aa  56.6  0.0000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.326195  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  27.27 
 
 
228 aa  57  0.0000001  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_010511  M446_2719  cyclic nucleotide-binding protein  32.21 
 
 
151 aa  56.6  0.0000001  Methylobacterium sp. 4-46  Bacteria  normal  0.460468  normal  0.384505 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  26.98 
 
 
230 aa  57  0.0000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4541  cyclic nucleotide-binding protein  31.3 
 
 
426 aa  56.6  0.0000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2700  cyclic nucleotide-binding protein  31.43 
 
 
215 aa  56.6  0.0000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.00108848  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  28.57 
 
 
230 aa  55.8  0.0000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  25.55 
 
 
254 aa  56.2  0.0000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  29.08 
 
 
230 aa  56.2  0.0000002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_009565  TBFG_13268  transmembrane transport protein  35.35 
 
 
1048 aa  56.2  0.0000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.321047 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  28.33 
 
 
226 aa  55.8  0.0000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  28.83 
 
 
236 aa  56.2  0.0000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3019  cyclic nucleotide-binding protein  30.5 
 
 
149 aa  55.8  0.0000002  Methylobacterium populi BJ001  Bacteria  normal  0.852704  normal 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  27.2 
 
 
225 aa  55.8  0.0000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2122  cyclic nucleotide-regulated small mechanosensitive ion channel  27.63 
 
 
489 aa  56.6  0.0000002  Burkholderia xenovorans LB400  Bacteria  normal  0.510942  normal 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25.19 
 
 
229 aa  56.2  0.0000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008312  Tery_1037  cyclic nucleotide-binding protein  24.59 
 
 
227 aa  55.8  0.0000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.272663 
 
 
-
 
NC_008312  Tery_2905  cyclic nucleotide-binding protein  27.07 
 
 
157 aa  56.2  0.0000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0600936 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  25.38 
 
 
223 aa  55.8  0.0000002  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  28.57 
 
 
230 aa  56.2  0.0000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.18 
 
 
226 aa  56.2  0.0000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  25.49 
 
 
224 aa  56.2  0.0000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  26.32 
 
 
225 aa  56.2  0.0000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  28.57 
 
 
230 aa  55.8  0.0000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
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