More than 300 homologs were found in PanDaTox collection
for query gene TDE2616 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE2616  cyclic nucleotide-binding protein  100 
 
 
219 aa  444  1.0000000000000001e-124  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0098  putative transcriptional regulator, Crp/Fnr family  36.36 
 
 
211 aa  156  2e-37  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  4.4392599999999995e-22  n/a   
 
 
-
 
NC_011145  AnaeK_2607  cyclic nucleotide-binding protein  29.47 
 
 
215 aa  114  2.0000000000000002e-24  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2700  cyclic nucleotide-binding protein  30.43 
 
 
215 aa  112  3e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.00108848  n/a   
 
 
-
 
NC_007760  Adeh_1256  cyclic nucleotide-binding domain-containing protein  29.95 
 
 
215 aa  110  2.0000000000000002e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  29.74 
 
 
225 aa  104  1e-21  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0067  cyclic nucleotide-binding protein  30.37 
 
 
415 aa  104  1e-21  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  31.16 
 
 
224 aa  103  3e-21  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  30.16 
 
 
225 aa  92.8  3e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  28.64 
 
 
243 aa  93.2  3e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.6 
 
 
224 aa  92.8  4e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  30.16 
 
 
225 aa  91.7  8e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.29 
 
 
226 aa  91.7  8e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  29.84 
 
 
224 aa  90.1  2e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  28.42 
 
 
220 aa  90.1  2e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  28.27 
 
 
228 aa  89.7  3e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  27.59 
 
 
226 aa  89  6e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  30.37 
 
 
224 aa  88.2  8e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  28.16 
 
 
243 aa  88.2  8e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  30.37 
 
 
224 aa  87.4  1e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  29.84 
 
 
224 aa  87  2e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  29.95 
 
 
230 aa  87  2e-16  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.75 
 
 
225 aa  87.4  2e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6450  putative transcriptional regulator, Crp/Fnr family  29.55 
 
 
253 aa  87  2e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  27.87 
 
 
226 aa  87.4  2e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  27.23 
 
 
242 aa  87  2e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.04 
 
 
225 aa  86.7  3e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  29.29 
 
 
241 aa  85.9  4e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  29.84 
 
 
224 aa  86.3  4e-16  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  29.84 
 
 
224 aa  86.3  4e-16  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  29.84 
 
 
224 aa  86.3  4e-16  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  28.04 
 
 
228 aa  85.9  5e-16  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  27.23 
 
 
225 aa  85.9  5e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  29.44 
 
 
230 aa  85.5  6e-16  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.46 
 
 
228 aa  85.1  7e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  29.84 
 
 
224 aa  85.1  7e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  28.8 
 
 
224 aa  84.7  9e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  29.32 
 
 
224 aa  84.7  0.000000000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  29.31 
 
 
225 aa  83.6  0.000000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  28.04 
 
 
267 aa  83.6  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  29.47 
 
 
226 aa  83.6  0.000000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  25.4 
 
 
226 aa  83.2  0.000000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  26.74 
 
 
227 aa  82.4  0.000000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  28.5 
 
 
219 aa  82.4  0.000000000000005  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  27.37 
 
 
225 aa  82  0.000000000000006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.39 
 
 
226 aa  82  0.000000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  28.1 
 
 
230 aa  81.6  0.000000000000008  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  26.04 
 
 
225 aa  80.5  0.00000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  30.43 
 
 
225 aa  80.5  0.00000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  33.62 
 
 
563 aa  80.5  0.00000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  34.03 
 
 
236 aa  78.6  0.00000000000008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  28.57 
 
 
228 aa  77.4  0.0000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  29.29 
 
 
232 aa  77.4  0.0000000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  29.8 
 
 
232 aa  77.4  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  25.77 
 
 
225 aa  76.3  0.0000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  27.27 
 
 
231 aa  75.9  0.0000000000005  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  27.57 
 
 
226 aa  75.5  0.0000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.94 
 
 
225 aa  74.7  0.0000000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  31.07 
 
 
227 aa  74.7  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  25 
 
 
227 aa  74.7  0.000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2357  transcriptional regulator, Crp/Fnr family  27.78 
 
 
212 aa  74.7  0.000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  28.04 
 
 
224 aa  73.9  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  28.87 
 
 
227 aa  73.6  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  28.87 
 
 
227 aa  73.6  0.000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  26.32 
 
 
239 aa  73.9  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  23.59 
 
 
221 aa  73.2  0.000000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_009441  Fjoh_4053  CRP/FNR family transcriptional regulator  29.9 
 
 
211 aa  72.8  0.000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  26.44 
 
 
229 aa  72.8  0.000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  29.84 
 
 
228 aa  72.8  0.000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  25.81 
 
 
226 aa  72.4  0.000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  28.43 
 
 
234 aa  72.4  0.000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  28.65 
 
 
224 aa  72  0.000000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  25.86 
 
 
236 aa  72  0.000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  29.02 
 
 
225 aa  72  0.000000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  23.59 
 
 
238 aa  71.6  0.000000000008  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  26.15 
 
 
231 aa  71.6  0.000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_011729  PCC7424_4798  cyclic nucleotide-binding protein  27.53 
 
 
227 aa  71.2  0.00000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  26.63 
 
 
229 aa  71.2  0.00000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  24.86 
 
 
226 aa  70.9  0.00000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  33.33 
 
 
570 aa  70.5  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  23.37 
 
 
229 aa  70.1  0.00000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  27.69 
 
 
226 aa  70.9  0.00000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  27.09 
 
 
229 aa  70.1  0.00000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_013440  Hoch_4460  putative transcriptional regulator, Crp/Fnr family  34.95 
 
 
171 aa  69.3  0.00000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3203  cyclic nucleotide-binding protein  32.46 
 
 
165 aa  69.3  0.00000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  34.11 
 
 
227 aa  68.9  0.00000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  27.83 
 
 
246 aa  68.6  0.00000000007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.01 
 
 
231 aa  68.2  0.00000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  26.5 
 
 
236 aa  67.8  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  29.63 
 
 
239 aa  67.8  0.0000000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  25.65 
 
 
225 aa  68.2  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  25.81 
 
 
236 aa  67.8  0.0000000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008346  Swol_1598  hypothetical protein  34.95 
 
 
407 aa  67.8  0.0000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.303519  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  21.47 
 
 
225 aa  67.4  0.0000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  27.03 
 
 
220 aa  67.4  0.0000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  25.67 
 
 
225 aa  67.4  0.0000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  27.96 
 
 
263 aa  67  0.0000000002  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  25.81 
 
 
236 aa  67.4  0.0000000002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  25 
 
 
229 aa  67  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4893  cyclic nucleotide-binding protein  33.93 
 
 
237 aa  67.4  0.0000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
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