| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1292 |
|---|
| Symbol | |
|---|
| ID | 3760674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1407969 |
|---|
| End bp | 1408457 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637786024 |
|---|
| Product | cyclic nucleotide-binding domain-containing protein |
|---|
| Protein accession | YP_391561 |
|---|
| Protein GI | 78485636 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG CCGCCGAAAG CCAATTAATC GCTGAATCTG TATTGGGTTC AGATTTAACG
CAAGAAGATT GTGAAACCTT GTCCGAAATT GTAAAACAAA AAAATCTGAC GAAAGAAGAG
GTGCTTTTCG AGCCAGACAC GTTGGATGGA AATCTGTATA TCTTAGTGGA AGGAAAACTG
GACATCTTAA AGGTTATCAA CCCCAATAAG ACCATTCACA TTAACACCTT GAAAAAAGGC
GCTTTAATTG GTGAGTTAAG TTTTATCGAC GGCATCGCAC ACACCATGCG TTTGCAGGCA
CGAAATGAAG CAACGGTTCT CATCTTACAC CGTGATGAGT TTGAGACGCT TGGTGAGCAA
AACCCTAAAC TCATGTTCAA TGTCATGAAA TCCATCTTAC GATTCTCGCA TCATTTACAA
CGTAAAATGC TGCAAGAAAA TCTAGAGATG TTACGCCTCG TACAAAGTGA GTATATGACG
CAATATTAA
|
|---|
| Protein sequence | MAKAAESQLI AESVLGSDLT QEDCETLSEI VKQKNLTKEE VLFEPDTLDG NLYILVEGKL
DILKVINPNK TIHINTLKKG ALIGELSFID GIAHTMRLQA RNEATVLILH RDEFETLGEQ
NPKLMFNVMK SILRFSHHLQ RKMLQENLEM LRLVQSEYMT QY
|
|---|
| |