| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0179 |
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| Symbol | |
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| ID | 6161185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 188903 |
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| End bp | 189370 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641662923 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001789219 |
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| Protein GI | 171056870 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATCG AAGATCTGAT GCAGGCGGTG CAGTCGCTCA ACACCGACGA CGCCTTTCAT
GCGCGCCTGG ATGTCATGCA ATGGCGCACG CTGGGCTCCT ACCTGGCGGC TTACCAGATG
CGTGCCGGCG ACCTGCTGAT CAAGCAGGGC GACGCCGATC GGACCGCCTA TTTCCTGGCG
CTGGGCACCT TGCAGGTCTA TCGCAACACC GGTTCGGGCG CCACCAGTCG CATCGCGCTG
CTGCGCCCCG GCTCATTGGC CGGCGAGACC GGGTTGTTCA GCGATCAGCC GCACTCGGCC
AACGTCGAGG CCATGACGGC CACGACGGTC TGGGCGATGC ACCTGCCGCG CTTCGAGGAA
CTCGCCGCGC GTGCGCCGGC GATCGCGATC GAGTTCCTGC GTGCCTCCGG CGCCGTGATG
GCCGCCCGCT TGCGCGCCAA CATGAACCAC CAGATCGCGG CGGCCTGA
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| Protein sequence | MGIEDLMQAV QSLNTDDAFH ARLDVMQWRT LGSYLAAYQM RAGDLLIKQG DADRTAYFLA
LGTLQVYRNT GSGATSRIAL LRPGSLAGET GLFSDQPHSA NVEAMTATTV WAMHLPRFEE
LAARAPAIAI EFLRASGAVM AARLRANMNH QIAAA
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