| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2122 |
|---|
| Symbol | |
|---|
| ID | 4007382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1026425 |
|---|
| End bp | 1027894 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637950584 |
|---|
| Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
|---|
| Protein accession | YP_553214 |
|---|
| Protein GI | 91778006 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.510942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCTGA CTCTGCTCTC CGCCGCCATG CTGGTGGCGA TCACACTCGT GGGAGTGCTC
GGGCTGCGGC GCTTCCCGGA CAAAGTCCGG ATCACGTTCG ACGTCTGCTG TTTTCTCGTC
ATCAGTTTCT ATTTTCACAA ACAGGGCATC TTCTTTCCGG TCTTCCCGCC CTTACCCGAT
CATGCCGACA GCGGAGCGCT GTGGCTGCGG GCGATAGGCG GCGCCTGGTG GCTGCTGGGT
TCGCGCATCG TGGTCGCCGG CCTCTGGTTC GCACTCCATC GCGACCGGCG CTCGCGCGGG
GCCCGGCTTT TCTCGGACCT GTTCGCTGCC GCTATTTATA TCGCGACCGC CGCGATCGTG
CTGAACTCGG TCTTCGCGCT GCCGATTACC GGCGTGGTCG CCACTTCCGG CGTCGTGGCG
ATCGTGCTCG CCCTCGCACT GCAGAACACA TTGGCGGACG TCTTTTCCGG CATCGCAGTC
GGCATCGAGG CACCGTTCGG CGTGGGAGAT CGAATCCAGA TCGCAGACAA GATCGAAGGC
GTCGTCGCGC AGATCAACTG GCGGTCGATC CGGATTCACA CGGATGGAGA CGACATGGCC
ATCATTCCAA ATAGCCTGAT TGCCAAGGCC GAGATCGTCA ACCGAAGCAG TCCGAGCCAA
CGCAGGGCCG CATCCGTGGA GATTACCTGC CCCGAAAGTG CGGTTCCGGA ACGCGTTATC
GAAACCCTGC TTCACGCGAC ACTGCTGTGT CCGGATATTC TTTCGGTGCC CGCGCCGAGT
GCCGTGCTCA CTCAACTCGG TGCAAGGCGC AATGCCTACA AGATTTCCTT TTTCGTCGGC
AACACGCGCC ACCTTTCTTC CACCAAAGAC ATCCTGCTGC GGGCCGCGCG CCGTCAACTG
CACTATGCCG GCTTTCTCGA CCAGGACCGC CGGGACGACA CAGCAACCCC CAACCTCTCC
GATGAGGCGC TGACGGTTCG CAGACTGCTT CGCGACATCA CCCTGTTCGA GTGCCTCGAC
GAGCGGCAAC TCGACAGTCT TGCCGATCTT TTCGAATTGC TCCGGCTCGA ACCCGGAGAG
GCGCTTTTCT CTGAAGACAC AGCGGACGCC GCGCTCTACA TGGTAGCCGC GGGGATCCTG
GAATTGACGC GAAAATCCGG AGCCGTAGCC GGGACGGTCG ACTGCATTGG CGCCGGCGAA
TATGTCGGCG AGATCGGCAT GCTCACCGCG GCGCCGCACG CGGCTACCGG AGTCGCACGC
ACCCATTGCA GAATCTACCG GCTTCCGCGC GAAGCGATCG CACCCCTGCT GGCAAAAAAC
ACGGAACTGG CGTTTGCTTT CGACAAGTCG GTACGCCGTG GAATGGAGAT ACTCCATCGT
GAGGTAGCCG TTCGTGCGTC GCCCGACATC GGTCCGCAAG GGCAATTGCT ACAGCGAATC
CGGAGCATCT TTCATTTCGG CTCCGATTGA
|
|---|
| Protein sequence | MNLTLLSAAM LVAITLVGVL GLRRFPDKVR ITFDVCCFLV ISFYFHKQGI FFPVFPPLPD
HADSGALWLR AIGGAWWLLG SRIVVAGLWF ALHRDRRSRG ARLFSDLFAA AIYIATAAIV
LNSVFALPIT GVVATSGVVA IVLALALQNT LADVFSGIAV GIEAPFGVGD RIQIADKIEG
VVAQINWRSI RIHTDGDDMA IIPNSLIAKA EIVNRSSPSQ RRAASVEITC PESAVPERVI
ETLLHATLLC PDILSVPAPS AVLTQLGARR NAYKISFFVG NTRHLSSTKD ILLRAARRQL
HYAGFLDQDR RDDTATPNLS DEALTVRRLL RDITLFECLD ERQLDSLADL FELLRLEPGE
ALFSEDTADA ALYMVAAGIL ELTRKSGAVA GTVDCIGAGE YVGEIGMLTA APHAATGVAR
THCRIYRLPR EAIAPLLAKN TELAFAFDKS VRRGMEILHR EVAVRASPDI GPQGQLLQRI
RSIFHFGSD
|
|---|
| |