Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1117 |
Symbol | |
ID | 3677301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1226303 |
End bp | 1228168 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637712667 |
Product | patatin |
Protein accession | YP_317731 |
Protein GI | 75675310 |
COG category | [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.142446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATCCG ATCCCGATCT TCAGCAACGC GACGCGCTGC TCCAGACCGT GCTTCGCGAC TACTTCGCGT CCGACAACGC AGAGATCCTG CACACCATCC GTTCCGTGGC CGAGTATGTC GATCTGGTCT CCGGCGCGAT CCTGCTGCGC CAGGGCGACA TCAGTAACGA CGTGTACTTC ATCCTGTCGG GACGGCTTCA CGCGTTCTCG GAGACCGAAT CCGGCGCGCG AAAAATTCTC GGAGAGATCG GGCGCGGCGA AACCATAGGC GAGCTTGCGC TGTTCACCGG CGAGCCGCGC TCGGCGACCG TCGTGGCGGT GCGCGATACG CTTCTGGTCA AGGTGACCCG CGCGATGATC GAGCGGACGA TCCTGCAGCA CCCGGAAATC GAGATGTCGA TGATGCGGGC CGTGATCCGG CGTTTCCGTC AGCGCGAACG CGAGCGGCAG GCGCCTCTGG TGCCGGTCAA GATCTGCATA CTGCCGATCA CTTCCGGGCC GGATGCAGCC GGTTTCGCGC GAAGCCTGCG CAACGCGCAA GCCGCCGAGG CCGGGCCGGT GGCAGTCGTC ACCAAAGATG ACGTCGCCAG CCACTTCGGC GCTCAGGATC AAGCGCCGGG AAAACGCAAC GACGCGCTCG CCGGCTATAT CGACGACATC GAGGCTCGGA ACCGCGCGGT ATACCTTGCC GCCGACGGAG GCGACACCGC ATGGACCCGG TTTTGCCTTC GTCATGCCGA CGAGGTGCTG CTGCTTGCCA ACGCCGGCCG CGATCCCGGC CTCTCGGCTG TGGAGCGTGC GTGCCTTTCG CCGGCCGCTC CCATCTCGAT CGCGCGGCAG ACGCTGGTCC TGCTGCACCG GGCTGATACG AGAATTCCCA CCAGCACCGC GCATTGGCTG AACGCGCGAC CGGACGCGCG GCACTTCCAC ATTCGTCCGG AACTGCCCGC CGACATGCGC CGCCTCGCTC GCATCGTATC AGGGCGGGCC ATCGGGCTCG TGCTGTCGGG CGGAGGCGCG CGCGGCTTCG CTCATGTCGG CGTCATCAAG GCGCTGGAAG AGGCAGGCAT TCCCGTCGAC ATGCTGGGCG GCAGCTCCAT CGGCGCGGTC ATGGGAATGG TGCTGGCGCT CGGGCGCAGC GCGGAGGAAG TCACGGCCGC CGTCCGAAAG GCGTTCCTCG AACATCCGAG AGGCAACGTC ACCGGCGACT ACAACTTCAT TCCGCTGGTG TCGCTGATCA AGGGTGCACG CACGCGAAGC GCGATGACGC AGGCCGTGCG CGACGCCACC GGCCGGGACG CGATCGACAG CGAGGATTGC TGGACCACCT TCTTCACCAT CGCATCAGAC TTTTCGACCG GCAGCGAAGC TGTCCTTCAG CGAGGCGACC TTACCCGCAA CGTCGGCGCA AGCTATGCGA TTCCCGGCGC GCTGCCGCCG GTCTTCGTCG GCGGACACAT GATGTACGAC GGCAGCACGT TCAACAATTT CCCGGTCGAC GTGATGGCCC GGCTCGGCGC GGGCCGCATC ATCGGCGTCG ACCTCTCGGT TGACCGCGAG CAGTTGTTCG ACATTGACGA TGTGCCGGGG ACGCTCACCT TGCTGCGCGA CAAACTAAGG CCGCGCGCGA AGCGGCGCTA CCGTCTGCCG AGCGTGCCCG AGACGATGCT GCGATCGTCC TTCATCACGT CGATCTCCAA ACAGAAGGAG ATGGGAAAGT TCACCGACCT GTTGTTCCGG CCGCGGATCT CCGACGGTCG CCTGCTCGAC TGGAGTCGCT TCGAAGAGGT GGTGGCCGCC GGCTACAGCC AGGCGAGGGA GATGCTGGCG GGCATGAGCG ACGAGCAGCG GAAGATGTTT CGCTAG
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Protein sequence | MKSDPDLQQR DALLQTVLRD YFASDNAEIL HTIRSVAEYV DLVSGAILLR QGDISNDVYF ILSGRLHAFS ETESGARKIL GEIGRGETIG ELALFTGEPR SATVVAVRDT LLVKVTRAMI ERTILQHPEI EMSMMRAVIR RFRQRERERQ APLVPVKICI LPITSGPDAA GFARSLRNAQ AAEAGPVAVV TKDDVASHFG AQDQAPGKRN DALAGYIDDI EARNRAVYLA ADGGDTAWTR FCLRHADEVL LLANAGRDPG LSAVERACLS PAAPISIARQ TLVLLHRADT RIPTSTAHWL NARPDARHFH IRPELPADMR RLARIVSGRA IGLVLSGGGA RGFAHVGVIK ALEEAGIPVD MLGGSSIGAV MGMVLALGRS AEEVTAAVRK AFLEHPRGNV TGDYNFIPLV SLIKGARTRS AMTQAVRDAT GRDAIDSEDC WTTFFTIASD FSTGSEAVLQ RGDLTRNVGA SYAIPGALPP VFVGGHMMYD GSTFNNFPVD VMARLGAGRI IGVDLSVDRE QLFDIDDVPG TLTLLRDKLR PRAKRRYRLP SVPETMLRSS FITSISKQKE MGKFTDLLFR PRISDGRLLD WSRFEEVVAA GYSQAREMLA GMSDEQRKMF R
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