Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1374 |
Symbol | |
ID | 4031845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1558506 |
End bp | 1560380 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637969850 |
Product | cyclic nucleotide-binding domain-containing protein |
Protein accession | YP_576658 |
Protein GI | 92116929 |
COG category | [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.138128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCCGG AAACCGATCC CGATCTTCAG CAACGCGACG CGCTGCTCCA GACCGTCCTT CGCGGCTATT TTGCGTCCGC CAACGCCGGG ATCCTGCGCA CCATCCAGTC CGAGGCCGAA TATGTCCACC TCGCCTCCGG CGCGACCCTG CTGCGCCAGG GCGACCTCAG CGACGACGTG TACCTCGTCG TGTCCGGGCG GCTGCAAGCC TTTTCCGAAA CTGAATCCGG CGTACGGAAA ATTCTGGGCG AGATCGGGCG CAGCGAGACC GTCGGTGAGC TCGCGCTGCT CACCGGCGAG CCGCGCCCGG CGACGGTGGT GGCGGTGCGC GATACCTTGC TGGTCAAAGT GACGCGCGCG ACGATCGAGC GCGCGATCAT GCAGGATCCA AAAATCGAAA TGTCGATGAT GCGGACCGTG ATCCGGCGAT TCCGCCACGG CGAGCGCGAG CGCGAGGCGC CCCTGGTACC GGTCAACGTC TGCATCCTGC CGGTCACGTC CGGGCTGGAT GCCGCCGATT TCGCGCAGAG CCTGCGCGAC GCGCAAGCCG CAGAGGCAAG GCCGGTGACA GTGGTCACCG CCGATGACAT CGCCGAGCGT TTCGGCACCA CCCCGGTCCA CCCGGCCGGA CGGCGCCACG ATGCGCTTGC CGGCTATATC GACGAGATCG AGGCCCGGAG CCGCGCAGTC TATCTCGCCG CCGACGGCCA CGACACCGCA TGGACCCGTT TCTGCCTGCG TCATGCCGAC GAGATTCTGC TGCTTGCCGA CGCCGATCGC GATCCCGGCC GGTCCATGGT CGAGCGGGCC TGCCTGTCGC CGGTAGGCTC CATCTCGATC GCGCGGCAGA CGCTGGTCCT GCTGCACAAG GCCGATACGA CCATTCCAAC CGGCACGGCG CGATGGCTGG ATGCGCGGCC GGCTGCGCGG CACTTTCACA TTCGTCCGCA GTTGCCGAGC GACATGCGTC GCATCGCTCG CATCGTCTCC GGACGCGGCA TCGGGCTCGT GCTGTCGGGC GGCGGCGCGC GCGGCTTCGC CCATATCGGG GTCATCAAGG CGCTGGAAGA AGCCGGCATT CCCGTCGACA TGCTCGGCGG CAGTTCGATC GGCGCTGTCA TGGGCATGGT GCTGGCGCTC GGACGCAGCG CGGACGAGGT CGCGGCCGCC GTCCGCAAGG CATTTCCCCT GCATCCGACG GGCAACGTGA CCGGCGACTA CAACTTCATC CCGCTGGTGT CGCTGATCAA GGGTGCACGC TCGCGCGGCG CGACGGCGCA AGCCGTGCGC GACGCCACCG GCCAGGATGC GGTCGACAGC GAGGATTGCT GGACCACCTT CTTCACGATG GCATCAGACT TCTCGACCGG CCGCGAAGCC GTGCTGCTGC GCGGCGACCT CGTCCGCAAC GTCGGCGCGA GCTACGCAAT CCCCGGAGCA CTGCCGCCGG TGTTCGTCGA CGGCCACATG ATGTATGACG GCGGCACGTT CAATAATTTT CCGGTCGATG TGATGGCGCA GCTCGGTGCC GGCCGCATCA TCGGCGTCGA CCTCTCGGTC AACCGAGAGC AGGTGTTCGA CATAGACCGC GTGCCGGGAA TGCTCGCCTT GCTGCGCGAC AAGCTCAGGC CGCGCGCGAA GCGACGCTAC CCTCTGCCGA GCGTGCCGGA GACGCTGCTG CGGTCGTCCT TCATCACCTC GCTCTCGAAG CAGAAAGCGA TGGGGCAGTT CACCGACCTG TTGTTCCGGC CGCGCATCGC CGAAGGTCGC CTGCTGGACT GGAGCCGTTT CGAGGAAGTG GTCGCCGCCG GCTACAGCCA GGCAAGGCAG GTGCTGGCCG GTCTGACCGA CGAGCAGCGG GAGATGTTCC AATAG
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Protein sequence | MTPETDPDLQ QRDALLQTVL RGYFASANAG ILRTIQSEAE YVHLASGATL LRQGDLSDDV YLVVSGRLQA FSETESGVRK ILGEIGRSET VGELALLTGE PRPATVVAVR DTLLVKVTRA TIERAIMQDP KIEMSMMRTV IRRFRHGERE REAPLVPVNV CILPVTSGLD AADFAQSLRD AQAAEARPVT VVTADDIAER FGTTPVHPAG RRHDALAGYI DEIEARSRAV YLAADGHDTA WTRFCLRHAD EILLLADADR DPGRSMVERA CLSPVGSISI ARQTLVLLHK ADTTIPTGTA RWLDARPAAR HFHIRPQLPS DMRRIARIVS GRGIGLVLSG GGARGFAHIG VIKALEEAGI PVDMLGGSSI GAVMGMVLAL GRSADEVAAA VRKAFPLHPT GNVTGDYNFI PLVSLIKGAR SRGATAQAVR DATGQDAVDS EDCWTTFFTM ASDFSTGREA VLLRGDLVRN VGASYAIPGA LPPVFVDGHM MYDGGTFNNF PVDVMAQLGA GRIIGVDLSV NREQVFDIDR VPGMLALLRD KLRPRAKRRY PLPSVPETLL RSSFITSLSK QKAMGQFTDL LFRPRIAEGR LLDWSRFEEV VAAGYSQARQ VLAGLTDEQR EMFQ
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