More than 300 homologs were found in PanDaTox collection
for query gene CHU_2082 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008255  CHU_2082  two-component response regulator, cheY-like  100 
 
 		 149 aa  305  1.0000000000000001e-82  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.988257  normal  1 
 
 
-
 
NC_009441  Fjoh_3201  response regulator receiver protein  44.44 
 
 		 150 aa  112  2.0000000000000002e-24  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_1220  CheY-like response regulator  42.98 
 
 		 133 aa  88.2  3e-17  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0243191  normal  1 
 
 
-
 
NC_008255  CHU_3545  response regulator for Gln (sensor glnL) (nitrogen regulator I, NRI)  37.61 
 
 		 148 aa  82.8  0.000000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.000295304  normal  0.0892706 
 
 
-
 
NC_008255  CHU_1900  response regulator  33.08 
 
 		 148 aa  80.1  0.000000000000009  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.176755  normal  0.0491434 
 
 
-
 
NC_013037  Dfer_2513  response regulator receiver protein  33.06 
 
 		 149 aa  79.7  0.00000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.321661  normal  1 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  36.11 
 
 		 383 aa  79.7  0.00000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  35.48 
 
 		 316 aa  77  0.00000000000008  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_3767  response regulator receiver protein  35.43 
 
 		 149 aa  77  0.00000000000009  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  33.08 
 
 		 1691 aa  77  0.00000000000009  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_3740  response regulator receiver protein  36.28 
 
 		 166 aa  76.3  0.0000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_3361  response regulator receiver protein  41.18 
 
 		 168 aa  76.6  0.0000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.937091  n/a   
 
 
-
 
NC_008025  Dgeo_1899  response regulator receiver protein  33.06 
 
 		 139 aa  75.1  0.0000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.727216  normal  0.206125 
 
 
-
 
NC_008576  Mmc1_1726  putative PAS/PAC sensor protein  35.65 
 
 		 504 aa  75.5  0.0000000000003  Magnetococcus sp. MC-1  Bacteria  normal  0.0909206  normal  0.287685 
 
 
-
 
NC_013037  Dfer_5179  response regulator receiver protein  35.19 
 
 		 292 aa  74.7  0.0000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.172349 
 
 
-
 
NC_013730  Slin_0384  response regulator receiver protein  30.07 
 
 		 143 aa  74.7  0.0000000000004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.499029 
 
 
-
 
NC_013440  Hoch_1357  response regulator receiver protein  34.51 
 
 		 148 aa  74.3  0.0000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.463554  normal  0.0634619 
 
 
-
 
NC_013132  Cpin_3744  response regulator receiver protein  40.57 
 
 		 134 aa  74.3  0.0000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.139387  hitchhiker  0.00363561 
 
 
-
 
NC_013132  Cpin_1791  response regulator receiver protein  35.78 
 
 		 131 aa  73.9  0.0000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  32.37 
 
 		 331 aa  73.9  0.0000000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0507  response regulator receiver protein  33.06 
 
 		 299 aa  73.9  0.0000000000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_3819  response regulator receiver protein  42.16 
 
 		 154 aa  73.6  0.0000000000008  Flavobacterium johnsoniae UW101  Bacteria  normal  0.752966  n/a   
 
 
-
 
NC_009441  Fjoh_3822  response regulator receiver protein  35.65 
 
 		 160 aa  73.9  0.0000000000008  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0383482  n/a   
 
 
-
 
NC_009441  Fjoh_2652  response regulator receiver protein  35.82 
 
 		 242 aa  73.2  0.000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_3486  response regulator receiver protein  39.25 
 
 		 149 aa  72.8  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_1464  response regulator receiver protein  37.7 
 
 		 134 aa  72.4  0.000000000002  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.000820366  normal  0.014977 
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  31.16 
 
 		 364 aa  72.4  0.000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_009441  Fjoh_3821  response regulator receiver protein  35.21 
 
 		 151 aa  72.4  0.000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.305029  n/a   
 
 
-
 
NC_002977  MCA3081  sensory box protein/response regulator  33.04 
 
 		 710 aa  72  0.000000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.789878  n/a   
 
 
-
 
NC_003910  CPS_1619  DNA-binding response regulator  35.09 
 
 		 185 aa  71.6  0.000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  0.208637  n/a   
 
 
-
 
NC_009441  Fjoh_2317  response regulator receiver protein  33.06 
 
 		 149 aa  72  0.000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_4005  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.96 
 
 		 696 aa  72  0.000000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4416  response regulator receiver protein  30.71 
 
 		 163 aa  71.2  0.000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.499791 
 
 
-
 
NC_009441  Fjoh_3567  response regulator receiver protein  35.71 
 
 		 148 aa  71.6  0.000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  31.58 
 
 		 339 aa  70.9  0.000000000006  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_2205  multi-sensor hybrid histidine kinase  31.3 
 
 		 887 aa  70.9  0.000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.188088 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  32.84 
 
 		 338 aa  70.9  0.000000000006  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_1998  response regulator receiver protein  33.64 
 
 		 140 aa  70.5  0.000000000007  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  32.84 
 
 		 338 aa  70.5  0.000000000007  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  32.84 
 
 		 338 aa  70.5  0.000000000007  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  32.84 
 
 		 338 aa  70.5  0.000000000007  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_0100  response regulator receiver protein  27.12 
 
 		 141 aa  70.5  0.000000000008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4302  response regulator receiver protein  30.25 
 
 		 124 aa  70.1  0.000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_0424  response regulator receiver protein  37.39 
 
 		 150 aa  70.1  0.000000000009  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  31.34 
 
 		 338 aa  69.7  0.00000000001  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_2356  PAS/PAC sensor hybrid histidine kinase  29.75 
 
 		 602 aa  69.7  0.00000000001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4841  response regulator receiver protein  31.54 
 
 		 149 aa  70.1  0.00000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  31.34 
 
 		 338 aa  69.7  0.00000000001  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  31.34 
 
 		 338 aa  69.7  0.00000000001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3612  response regulator receiver protein  28.33 
 
 		 128 aa  69.3  0.00000000001  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  36.79 
 
 		 374 aa  68.9  0.00000000002  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0860  response regulator  32.84 
 
 		 339 aa  69.3  0.00000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  30 
 
 		 375 aa  68.9  0.00000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  30.95 
 
 		 348 aa  69.3  0.00000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_007796  Mhun_1941  response regulator receiver domain-containing protein  36.97 
 
 		 156 aa  68.9  0.00000000002  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_3548  PAS/PAC sensor hybrid histidine kinase  29.69 
 
 		 1007 aa  68.9  0.00000000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.508984  n/a   
 
 
-
 
NC_007948  Bpro_3512  response regulator receiver domain-containing protein  29.41 
 
 		 150 aa  68.9  0.00000000002  Polaromonas sp. JS666  Bacteria  normal  0.592796  normal  0.130265 
 
 
-
 
NC_007948  Bpro_3513  response regulator receiver domain-containing protein  26.75 
 
 		 150 aa  68.9  0.00000000002  Polaromonas sp. JS666  Bacteria  normal  0.126367  normal  0.123274 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  29.29 
 
 		 331 aa  69.3  0.00000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  36.79 
 
 		 374 aa  68.9  0.00000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008553  Mthe_0407  response regulator receiver protein  35.09 
 
 		 142 aa  68.9  0.00000000002  Methanosaeta thermophila PT  Archaea  normal  0.177022  n/a   
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  36.54 
 
 		 395 aa  69.3  0.00000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_013037  Dfer_0372  response regulator receiver protein  34.75 
 
 		 141 aa  68.9  0.00000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.0420195 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  31.34 
 
 		 338 aa  69.3  0.00000000002  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  33.61 
 
 		 391 aa  68.6  0.00000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_009338  Mflv_0999  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  32.52 
 
 		 872 aa  68.6  0.00000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  35.24 
 
 		 322 aa  68.6  0.00000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  31.34 
 
 		 339 aa  68.6  0.00000000003  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_2712  response regulator receiver sensor signal transduction histidine kinase  34.78 
 
 		 414 aa  67.8  0.00000000004  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007575  Suden_0218  diguanylate cyclase  31.9 
 
 		 304 aa  68.2  0.00000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  30.83 
 
 		 319 aa  68.2  0.00000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  35.58 
 
 		 352 aa  67.8  0.00000000005  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_4440  response regulator receiver protein  32.48 
 
 		 145 aa  67.8  0.00000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_0501  response regulator receiver domain-containing protein  32.23 
 
 		 141 aa  67.8  0.00000000005  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_2718  response regulator receiver protein  32.33 
 
 		 153 aa  67.8  0.00000000005  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.50209 
 
 
-
 
NC_012850  Rleg_0315  response regulator receiver protein  33.88 
 
 		 141 aa  67.4  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  30.43 
 
 		 338 aa  67.4  0.00000000006  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_2436  response regulator receiver protein  33.64 
 
 		 144 aa  67.4  0.00000000006  Frankia sp. EAN1pec  Bacteria  normal  0.287992  normal  0.438631 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  27.04 
 
 		 353 aa  67.4  0.00000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  37.5 
 
 		 303 aa  67.4  0.00000000007  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.13601 
 
 
-
 
NC_011729  PCC7424_3150  response regulator receiver protein  28.89 
 
 		 152 aa  67.4  0.00000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.14204 
 
 
-
 
NC_013132  Cpin_3763  response regulator receiver protein  33.62 
 
 		 150 aa  67.4  0.00000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.113093  normal  0.0284745 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  30.47 
 
 		 328 aa  67  0.00000000007  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2788  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  29.51 
 
 		 715 aa  67  0.00000000008  Dechloromonas aromatica RCB  Bacteria  normal  0.941936  normal  1 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  31.93 
 
 		 407 aa  67  0.00000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_013037  Dfer_0337  response regulator receiver protein  41.18 
 
 		 126 aa  67  0.00000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.081011  hitchhiker  0.000378914 
 
 
-
 
NC_007908  Rfer_3704  response regulator receiver domain-containing protein  30.71 
 
 		 129 aa  67  0.00000000008  Rhodoferax ferrireducens T118  Bacteria  normal  0.600519  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  30.17 
 
 		 359 aa  67  0.00000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0828  response regulator receiver modulated diguanylate cyclase  32.62 
 
 		 324 aa  67  0.00000000008  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  30.83 
 
 		 340 aa  67  0.00000000008  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.129077 
 
 
-
 
NC_007333  Tfu_2342  response regulator receiver  29.84 
 
 		 143 aa  67  0.00000000009  Thermobifida fusca YX  Bacteria  hitchhiker  0.00382381  n/a   
 
 
-
 
NC_007908  Rfer_2262  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  31.09 
 
 		 853 aa  67  0.00000000009  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_4344  response regulator receiver domain-containing protein  31.75 
 
 		 146 aa  66.2  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.676678  normal  1 
 
 
-
 
NC_008010  Dgeo_2528  response regulator receiver protein  34.51 
 
 		 145 aa  66.2  0.0000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_0290  response regulator receiver protein  29.14 
 
 		 151 aa  66.6  0.0000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000140993  n/a   
 
 
-
 
NC_013730  Slin_5022  response regulator receiver protein  31.71 
 
 		 126 aa  66.6  0.0000000001  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  31.78 
 
 		 395 aa  66.2  0.0000000001  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_2145  multi-sensor hybrid histidine kinase  36.54 
 
 		 1271 aa  65.5  0.0000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.152151  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  31.25 
 
 		 337 aa  65.5  0.0000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_010717  PXO_01607  PilL protein  33.05 
 
 		 2301 aa  65.5  0.0000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.68194  n/a   
 
 
-
 
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