Gene Dfer_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0507 
Symbol 
ID8224074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp569508 
End bp570407 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content47% 
IMG OID644928383 
Productresponse regulator receiver protein 
Protein accessionYP_003084939 
Protein GI255034318 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA AGGATATGCA ACTAAGCAAA ACAATCTTTC TGGTTGATGA TGACCCCGAT 
GACAGGCTGC TGATTTCCGA GGCAATACAC AGCGTCATCA AGGCGGTGCG GATTGTTGAA
ATCCAAAGCG GGATTGACCT GCTTAACATA CTCAGCAGCC AGCCAGGCCA GTTCCCGGAT
TTAATACTCC TGGACATGAA CATGCCCGGA ATCAATGGCT TGGAAACCCT TTCACAACTG
AGAGAAAAAC CGAGTCAGCG GTGTTTTCCA ATAATCATGT TATCGACGGC TTGTAATAAC
GATTTGGTTA AGCAAGCTTA CATGCTTGGA GTTAATGCAT TTATGCCCAA ACCAATTACC
TCCGGGCATT ACAGAGCGGT CGCGAGGGCC GTCAACCTGT GTTTCCTGAA TCATATCGAT
AGTACCCCTC CTAATTTGTC AGTTTCCGAA ACTGAAAAGG AAACCAGCCT AATCGTTATC
GAAGACAATG AAGACCACTG GAACCTGATC GACATGGCAA TCAGGCAAAA GAAACATCAT
TTGAAATTGA TCAGGCTGCG TGACAAAAGC AGTACGCTGG AATTTCTGGA TAGTTGCTAC
AAACGCCTGG CCCCCTACCC GAAGTTGATA CTTTTAGACC TATACATGCC AACCAAAAAA
GATGGGCTCA GTATTCTGGA CTCAATCCGG TACTTCATCT CTGTGAATAA CCTGCCCCAG
GTGCCCGTTT TCGTTTTTAC CTTTTCCGAT CATCAGCAGG ACATCGACGC CTGCTATGCA
ATACAGGCAA ATGCAGTGAT AACAAAACCT ACCGATTTGA CCCACTGGCC GCTCCTATTC
GCAGACTTGC TTGATTTATG GGGCCAAACG GTGCGTCTGC CAAACAACCA GATGGCCTAG
 
Protein sequence
MNTKDMQLSK TIFLVDDDPD DRLLISEAIH SVIKAVRIVE IQSGIDLLNI LSSQPGQFPD 
LILLDMNMPG INGLETLSQL REKPSQRCFP IIMLSTACNN DLVKQAYMLG VNAFMPKPIT
SGHYRAVARA VNLCFLNHID STPPNLSVSE TEKETSLIVI EDNEDHWNLI DMAIRQKKHH
LKLIRLRDKS STLEFLDSCY KRLAPYPKLI LLDLYMPTKK DGLSILDSIR YFISVNNLPQ
VPVFVFTFSD HQQDIDACYA IQANAVITKP TDLTHWPLLF ADLLDLWGQT VRLPNNQMA