More than 300 homologs were found in PanDaTox collection
for query gene Sden_3723 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_3723  response regulator receiver  100 
 
 
338 aa  687    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  71.88 
 
 
331 aa  489  1e-137  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  72.33 
 
 
331 aa  482  1e-135  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  69.42 
 
 
331 aa  481  1e-134  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  71.38 
 
 
331 aa  481  1e-134  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  71.38 
 
 
331 aa  481  1e-134  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  68.65 
 
 
328 aa  460  9.999999999999999e-129  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  68.63 
 
 
337 aa  454  1e-127  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  63.75 
 
 
328 aa  431  1e-120  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  63.16 
 
 
331 aa  424  1e-117  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  59.94 
 
 
333 aa  417  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  59.38 
 
 
356 aa  403  1e-111  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  60.06 
 
 
340 aa  387  1e-106  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  54.68 
 
 
346 aa  383  1e-105  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  55.42 
 
 
338 aa  371  1e-102  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  54.6 
 
 
338 aa  371  1e-101  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  54.82 
 
 
339 aa  369  1e-101  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  55.05 
 
 
379 aa  370  1e-101  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  54.6 
 
 
338 aa  370  1e-101  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  54.6 
 
 
338 aa  370  1e-101  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  56.8 
 
 
343 aa  370  1e-101  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  56.13 
 
 
338 aa  371  1e-101  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  54.6 
 
 
338 aa  370  1e-101  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  56.13 
 
 
338 aa  371  1e-101  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  52.01 
 
 
348 aa  365  1e-100  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  51.72 
 
 
348 aa  365  1e-100  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  55.21 
 
 
338 aa  367  1e-100  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  50.99 
 
 
367 aa  360  3e-98  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  52.34 
 
 
350 aa  359  5e-98  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  53.68 
 
 
340 aa  356  2.9999999999999997e-97  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  53.99 
 
 
339 aa  354  1e-96  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  51.14 
 
 
357 aa  353  2e-96  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  51.06 
 
 
347 aa  353  2.9999999999999997e-96  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  53.99 
 
 
339 aa  353  2.9999999999999997e-96  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  51.65 
 
 
360 aa  340  2e-92  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  51.66 
 
 
352 aa  334  1e-90  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  48.99 
 
 
358 aa  330  2e-89  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  47.58 
 
 
363 aa  323  3e-87  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  47.25 
 
 
354 aa  315  8e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  45.2 
 
 
377 aa  301  9e-81  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  46.36 
 
 
359 aa  300  2e-80  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2945  response regulator receiver modulated metal dependent phosphohydrolase  44.77 
 
 
377 aa  290  2e-77  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  41.83 
 
 
383 aa  289  4e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  45.13 
 
 
361 aa  288  6e-77  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  45.2 
 
 
365 aa  288  6e-77  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  42.37 
 
 
377 aa  283  4.0000000000000003e-75  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  44.31 
 
 
370 aa  283  4.0000000000000003e-75  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00476  two-component system regulatory protein with HD-GYP domain  44.79 
 
 
322 aa  283  4.0000000000000003e-75  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  42.37 
 
 
377 aa  281  8.000000000000001e-75  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  44.03 
 
 
391 aa  281  1e-74  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  42.35 
 
 
384 aa  280  2e-74  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.8 
 
 
348 aa  281  2e-74  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  42.94 
 
 
363 aa  280  3e-74  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  42.07 
 
 
379 aa  277  2e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  43.18 
 
 
375 aa  276  3e-73  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  42.09 
 
 
395 aa  275  6e-73  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  43.24 
 
 
363 aa  273  3e-72  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  43.95 
 
 
371 aa  269  5e-71  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  43.02 
 
 
365 aa  268  8e-71  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  39.19 
 
 
365 aa  267  2e-70  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  41.03 
 
 
369 aa  267  2e-70  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  40.36 
 
 
399 aa  265  7e-70  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  42.18 
 
 
350 aa  264  2e-69  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  43.42 
 
 
360 aa  262  6e-69  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  41.18 
 
 
350 aa  261  1e-68  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  42.25 
 
 
377 aa  259  3e-68  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  41.57 
 
 
353 aa  258  8e-68  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  41.31 
 
 
364 aa  258  1e-67  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  39.53 
 
 
356 aa  256  3e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0963  response regulator  38.9 
 
 
441 aa  256  5e-67  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1406  response regulator  41.71 
 
 
351 aa  254  2.0000000000000002e-66  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  39.14 
 
 
359 aa  253  4.0000000000000004e-66  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  40.73 
 
 
368 aa  252  6e-66  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  41.46 
 
 
348 aa  251  2e-65  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  40.86 
 
 
367 aa  248  8e-65  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  40.44 
 
 
362 aa  248  8e-65  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  40.57 
 
 
364 aa  247  3e-64  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  40.83 
 
 
353 aa  244  1.9999999999999999e-63  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  40.6 
 
 
344 aa  240  2.9999999999999997e-62  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  36.8 
 
 
361 aa  240  2.9999999999999997e-62  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_010505  Mrad2831_1613  response regulator receiver modulated metal dependent phosphohydrolase  38.86 
 
 
487 aa  239  4e-62  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.350204  hitchhiker  0.000130728 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  38.75 
 
 
369 aa  239  5e-62  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  38.75 
 
 
369 aa  239  5e-62  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_002939  GSU2574  response regulator  39.18 
 
 
368 aa  235  6e-61  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  38.6 
 
 
353 aa  234  1.0000000000000001e-60  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_011989  Avi_0523  Response regulator protein  37.95 
 
 
359 aa  234  2.0000000000000002e-60  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  40.48 
 
 
345 aa  233  3e-60  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  39.34 
 
 
362 aa  233  3e-60  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  40.51 
 
 
382 aa  232  6e-60  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3823  response regulator receiver modulated metal dependent phosphohydrolase  35.57 
 
 
354 aa  231  2e-59  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  37.46 
 
 
376 aa  230  3e-59  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  37.46 
 
 
378 aa  229  6e-59  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  39.81 
 
 
331 aa  228  1e-58  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  37.24 
 
 
373 aa  228  2e-58  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  36.53 
 
 
385 aa  226  3e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.03 
 
 
268 aa  226  4e-58  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_009656  PSPA7_5503  response regulator receiver  37.57 
 
 
393 aa  224  1e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  34.69 
 
 
362 aa  223  3e-57  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  37.81 
 
 
331 aa  223  4.9999999999999996e-57  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_009972  Haur_2699  response regulator receiver modulated metal dependent phosphohydrolase  38.44 
 
 
328 aa  222  6e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
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