Gene PXO_00476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00476 
Symbol 
ID6305375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp1910134 
End bp1911102 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID642639144 
Producttwo-component system regulatory protein with HD-GYP domain 
Protein accessionYP_001913017 
Protein GI188576088 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGTGTCG ACGACGAATC CAGCAACCTG GCCACCCTGC GCCAGCTGCT GCGCGACGAC 
TTCGCGCTGG TGTTCGCCAA ATCCGGCGGC GACGCCCTGG ATGCGGTGAC GCGCCACACG 
CCCAAGCTCA TCCTGCTGGA TGTCGAATTG CCGGACATGG ACGGCTATGC GGTGGCGCGC 
GCGCTCAAGC AGCAGCCGTC CAGCAACGCC ATCCCGATTC TGTTCGTGAG TTCGCGCAAC 
AGCGAGCACG ACGAACGCCT CGGGCTGGAG GCAGGCGCGG CCGATTACGT CAGCAAGCCC 
TACTCGCCTA CGCTGCTCAA GGCACGTATC GCCACTCAAT TGAAGCTGGC CGAGAACGTA 
CGCCTTGCCC AGCAATACCG CGACGCGATC CATTTGCTCG GCACCGCCGG CCGGGGCCAG 
GACGCCAACA CCGGCGCACA TATCTGGCGC ATGGCGGTGT ATGCGCGGGT CCTGGCCGAA 
GCAGTGGGCT GGTCGCCGCA GCAGGCGCAG ACCCTGCAGG ACGCCGCCCC GCTGCACGAC 
GCCGGCAAGA TCGCGGTGCC CGGCAGCATT CTGCAAAAGC CCGATTCGCT GGACGAACAC 
GAACGCTCGA TGGTGCGTCA GCACCCGCAA GCCGGCCACG ATCTCTTGCG CCACGGCCGC 
GGTGCGATAT TCCAGCTGGC AGCGGAAATC GCGCTGCATC ATCACGAATG CTGGGACGGC 
AGCGGCTATC CCGAGGGGTT GTCCGGAGAT GCCATTCCCG AATCGGCACG CATCGTGGCG 
GTGGCCGACG TGTTCGACGC GCTGTGCGGG CGGCGCGCCT ACAAGGCGCC ATGGACCGTG 
GAAGACGCCA TGCGCAAGCT CGACAGCATG GCAGGCAAAC AATTGGAACC GCGGCTGGTG 
CAGCATTTCC GTGAGGCATT ACCGCAGATT CTGCAGATCA AGGACGCCTG GGACAGCCCT 
GCGCCATAG
 
Protein sequence
MCVDDESSNL ATLRQLLRDD FALVFAKSGG DALDAVTRHT PKLILLDVEL PDMDGYAVAR 
ALKQQPSSNA IPILFVSSRN SEHDERLGLE AGAADYVSKP YSPTLLKARI ATQLKLAENV 
RLAQQYRDAI HLLGTAGRGQ DANTGAHIWR MAVYARVLAE AVGWSPQQAQ TLQDAAPLHD 
AGKIAVPGSI LQKPDSLDEH ERSMVRQHPQ AGHDLLRHGR GAIFQLAAEI ALHHHECWDG 
SGYPEGLSGD AIPESARIVA VADVFDALCG RRAYKAPWTV EDAMRKLDSM AGKQLEPRLV 
QHFREALPQI LQIKDAWDSP AP