Gene Tcr_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2179 
Symbol 
ID3761870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2399450 
End bp2400496 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content43% 
IMG OID637786928 
Productresponse regulator receiver (CheY-like) modulated metal dependent phosphohydrolase 
Protein accessionYP_392441 
Protein GI78486516 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.378064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTTGA ACTTCCATAT TTTAATTGTT GACGACATCT CAGAAAACAT CCAAGTGGCC 
ATGAGCCTTC TTAGAGAAGA AGGCTATCAG TTCTCCTTTG CGACAGATGG TGAAGAGGCT
CTCAGACTGG CTGACGAAAA TGATTTCGAT CTAATCTTGC TCGACATTAT GATGCCGAGA
ATGGATGGTT ATGAAACGTG CCGCCGCTTG AAAGCCAATG CCCGGACACA AGACATTCCA
ATCATATTTT TAACCGCCAA AGTCGACATT GACGCCATCA GTAAAGGTTT CAAACTGGGC
GCGGTGGACT ACATCACCAA GCCTTTTCAT GGCGAAGAAC TCATTGCCCG AGTCAAAACG
CACTTGGAAC TGTATGCCAG TAAACAACTC TTAAAACAAA ACAACCTAAC GTTACAAGAA
AACCTGGTAC ACAGAGAGAA ACGGTACACC ACCGAACTTG AAGAAAATCA AAAAGAAATG
ATTTTCGTCC TGACAGAGCT GATGGAAGCC ACTTCAGATG AAACAGGTCA ACACATTCGT
CGTGTCGCAG AATATTCAAA ACTTCTGGCC CATTATCATC CTGGTTTATC TATTGACGAT
GAAATCATCA TTTACCATGC CGCGCCGATG CACGATATTG GTAAAATCAC CATTCCACTC
GACATTCTTC ACAAACCAGG AAAACTCACG GATGAAGAAT TCAACATCAT CAAAACCCAC
ACCACATCGG CTTATGAAAT GCTTCGATTT TCAAAACGAA AATTCATTAA ATCGGCTGCT
ATTATTTCCC TTCAACATCA TGAAAAATGG AATGGCACTG GTTATCCGAG TGGTTTAAAA
GGACAAGACA TCCATATTTA TGCCCGAATC GTCGCCATTG CGGATGTATT TGATGCCTTA
ACCCATAAAC GCGAATACAA AGATGCCTGG TCGATCGAGG CGGCGACCGA ATACATTCTG
GAACATAATG GCACTCAGTT TGACCCCCAA CTCATTGATA TTTTCACAGA GCACCTCGAT
GAATTTGTGG CGATTGCTAA AACATAG
 
Protein sequence
MHLNFHILIV DDISENIQVA MSLLREEGYQ FSFATDGEEA LRLADENDFD LILLDIMMPR 
MDGYETCRRL KANARTQDIP IIFLTAKVDI DAISKGFKLG AVDYITKPFH GEELIARVKT
HLELYASKQL LKQNNLTLQE NLVHREKRYT TELEENQKEM IFVLTELMEA TSDETGQHIR
RVAEYSKLLA HYHPGLSIDD EIIIYHAAPM HDIGKITIPL DILHKPGKLT DEEFNIIKTH
TTSAYEMLRF SKRKFIKSAA IISLQHHEKW NGTGYPSGLK GQDIHIYARI VAIADVFDAL
THKREYKDAW SIEAATEYIL EHNGTQFDPQ LIDIFTEHLD EFVAIAKT