Gene Daci_6015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6015 
Symbol 
ID5751646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6719805 
End bp6720806 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID641301157 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_001567028 
Protein GI160901446 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGC CCAATCTACT GGCAACGGAC AAGCGCCCGC GCCTGCTGCT GGTCGATGAC 
GACCCGACCA ACCTGCATGT GCTGCGCCAG ATCCTGGGCG AGGACTACCG GCTCTCGTTC
GCCACGGACG GGCGCAAGGC ACTGCAGCTG GCACAGCACC AGCCGGACCT GATCCTGCTG
GACATCATGA TGCCCGAGCT CGATGGCTAC GCCGTGTGCC GCCAGCTCAA GGCACAGGCC
GACACCGCCC GCATCCCGGT GATCTTCATC ACGGCCCTGT CGGACGGGCA GGACGAGGCG
CTGGGCTTTG CCTCCGGCGC GGTGGACTAC ATCGTCAAGC CCGTGCGTGC GCCCGTGGTG
CGCGCGCGGG TGCGCAACCA CCTGTCGCTG GTCAAGCTCG ACGAGTTGCG CAGCACCCGC
CTGCAGATCG TGCAGCGCCT GGGCCGCGCG GCCGAGTACC GCGACAACGA AACCGGCATG
CACGTGATCC GCATGAGCCA CTACGCAAAG ACGTTGGCGC TGGCGGCCGG CTGCACCGAC
GAGTGGGCCG ACGACCTGCT CAACGCCGCG CCCATGCACG ACGTGGGCAA GATCGGCATC
CCCGACGCCA TCCTGCTCAA GAACGGCCCG CTGACGGCCG AGGAATGGAC GGTCATGCGC
CGCCATCCGC AGATCGGCGC CGAGATCATC GGCGAGCACG ACTCCCAGGT GCTGCAGATG
GCCTACAGCA TTGCGCTGAC CCATCACGAG AAATGGGACG GCACGGGCTA CCCGCAGGGC
CTGGCGGGCG AGGACATTCC GCTGGCCTCG CGCATCGTGG CCGTGGCCGA CGTGTTCGAC
GCGCTCACCA CGGAGCGCCC CTACAAGCAC GCCTGGACCG TGGACGACGC CATGGAGCAC
ATAGAGCAGC AGGCCGGCGC CCACTTCGAC CCGCGCCTTG TGCCGCTGTT CATCGGCCTG
CGCCCGCAGC TGGAAGACAT ACGCGAGCGC TGGAAGGATT GA
 
Protein sequence
MNAPNLLATD KRPRLLLVDD DPTNLHVLRQ ILGEDYRLSF ATDGRKALQL AQHQPDLILL 
DIMMPELDGY AVCRQLKAQA DTARIPVIFI TALSDGQDEA LGFASGAVDY IVKPVRAPVV
RARVRNHLSL VKLDELRSTR LQIVQRLGRA AEYRDNETGM HVIRMSHYAK TLALAAGCTD
EWADDLLNAA PMHDVGKIGI PDAILLKNGP LTAEEWTVMR RHPQIGAEII GEHDSQVLQM
AYSIALTHHE KWDGTGYPQG LAGEDIPLAS RIVAVADVFD ALTTERPYKH AWTVDDAMEH
IEQQAGAHFD PRLVPLFIGL RPQLEDIRER WKD