More than 300 homologs were found in PanDaTox collection
for query gene Daro_3005 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_3005  response regulator receiver  100 
 
 
361 aa  736    Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  66.1 
 
 
375 aa  469  1.0000000000000001e-131  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  64.79 
 
 
360 aa  464  1e-129  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  59.66 
 
 
365 aa  439  9.999999999999999e-123  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  62.32 
 
 
364 aa  439  9.999999999999999e-123  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  57.46 
 
 
384 aa  424  1e-117  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  58.38 
 
 
371 aa  424  1e-117  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  59.72 
 
 
391 aa  423  1e-117  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  60.11 
 
 
377 aa  424  1e-117  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  59.49 
 
 
377 aa  416  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  59.49 
 
 
377 aa  416  9.999999999999999e-116  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  58.64 
 
 
395 aa  412  1e-114  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  55.99 
 
 
383 aa  409  1e-113  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  58.26 
 
 
377 aa  402  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  53.35 
 
 
365 aa  377  1e-103  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0963  response regulator  51.12 
 
 
441 aa  369  1e-101  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  53.52 
 
 
369 aa  371  1e-101  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  51.69 
 
 
353 aa  353  2e-96  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  51.68 
 
 
370 aa  346  3e-94  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  51.29 
 
 
363 aa  341  1e-92  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  49.72 
 
 
359 aa  333  3e-90  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  47.08 
 
 
376 aa  322  8e-87  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_009656  PSPA7_5503  response regulator receiver  47.08 
 
 
393 aa  313  2.9999999999999996e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  48.06 
 
 
346 aa  308  1.0000000000000001e-82  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  45.1 
 
 
364 aa  306  5.0000000000000004e-82  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_008463  PA14_63210  putative two-component response regulator  47.06 
 
 
393 aa  305  6e-82  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4003  response regulator  45 
 
 
357 aa  304  1.0000000000000001e-81  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  46.93 
 
 
348 aa  305  1.0000000000000001e-81  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  45.81 
 
 
395 aa  303  4.0000000000000003e-81  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  46.65 
 
 
348 aa  302  5.000000000000001e-81  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  48.51 
 
 
360 aa  299  6e-80  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  46.76 
 
 
347 aa  296  3e-79  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  44.57 
 
 
352 aa  296  4e-79  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  45.87 
 
 
365 aa  295  6e-79  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  44.51 
 
 
343 aa  295  1e-78  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  44.79 
 
 
379 aa  294  2e-78  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  44.94 
 
 
331 aa  293  3e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  45.81 
 
 
350 aa  292  6e-78  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  45.13 
 
 
338 aa  288  7e-77  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  45.07 
 
 
338 aa  285  9e-76  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  46.33 
 
 
339 aa  284  1.0000000000000001e-75  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  45.81 
 
 
331 aa  284  2.0000000000000002e-75  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  44.51 
 
 
340 aa  284  2.0000000000000002e-75  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  44.79 
 
 
338 aa  282  8.000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  44.79 
 
 
338 aa  282  8.000000000000001e-75  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  44.51 
 
 
338 aa  281  1e-74  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  44.51 
 
 
373 aa  281  2e-74  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  43.14 
 
 
328 aa  280  2e-74  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  42.58 
 
 
328 aa  280  3e-74  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  45.32 
 
 
331 aa  279  5e-74  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  42.49 
 
 
358 aa  276  3e-73  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  44.26 
 
 
338 aa  275  7e-73  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  44.26 
 
 
338 aa  275  8e-73  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  44.26 
 
 
338 aa  275  8e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  44.51 
 
 
356 aa  275  8e-73  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  44.26 
 
 
338 aa  275  8e-73  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  43.94 
 
 
339 aa  274  2.0000000000000002e-72  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  43.14 
 
 
337 aa  273  3e-72  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  44.61 
 
 
333 aa  273  3e-72  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2330  metal dependent phosphohydrolase  58.51 
 
 
466 aa  273  3e-72  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.541081  normal  0.158055 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  44.57 
 
 
339 aa  273  4.0000000000000004e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  43.18 
 
 
361 aa  272  5.000000000000001e-72  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  43.66 
 
 
331 aa  273  5.000000000000001e-72  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  43.66 
 
 
331 aa  273  5.000000000000001e-72  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  43.94 
 
 
331 aa  272  6e-72  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  43.5 
 
 
340 aa  267  2e-70  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  41.97 
 
 
363 aa  267  2e-70  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  40.49 
 
 
367 aa  263  4e-69  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  39.55 
 
 
359 aa  260  3e-68  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  40.69 
 
 
378 aa  258  1e-67  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  39.84 
 
 
379 aa  254  2.0000000000000002e-66  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  42.62 
 
 
348 aa  253  5.000000000000001e-66  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  41.35 
 
 
362 aa  252  7e-66  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_009831  Ssed_3778  response regulator  50.19 
 
 
629 aa  251  2e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  39.89 
 
 
354 aa  250  3e-65  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  41.41 
 
 
337 aa  247  2e-64  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_011312  VSAL_I2231  putative metal dependent phosphohydrolase  54.98 
 
 
440 aa  244  1.9999999999999999e-63  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0632  metal dependent phosphohydrolase  50 
 
 
654 aa  238  9e-62  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.0000219793  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  39.61 
 
 
350 aa  238  9e-62  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2945  response regulator receiver modulated metal dependent phosphohydrolase  40.23 
 
 
377 aa  238  1e-61  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  38.31 
 
 
350 aa  237  2e-61  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_009457  VC0395_A0913  hypothetical protein  54.98 
 
 
492 aa  234  2.0000000000000002e-60  Vibrio cholerae O395  Bacteria  normal  0.512089  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  37.92 
 
 
363 aa  233  5e-60  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  39.94 
 
 
348 aa  226  4e-58  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  40.91 
 
 
362 aa  221  1.9999999999999999e-56  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2574  response regulator  38.83 
 
 
368 aa  220  3e-56  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  35.94 
 
 
368 aa  217  2.9999999999999998e-55  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  38.1 
 
 
344 aa  216  5e-55  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  37.64 
 
 
368 aa  216  7e-55  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_011989  Avi_0523  Response regulator protein  36.44 
 
 
359 aa  216  7e-55  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  37.87 
 
 
362 aa  214  1.9999999999999998e-54  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  39.8 
 
 
369 aa  214  1.9999999999999998e-54  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  39.8 
 
 
369 aa  214  1.9999999999999998e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  38.56 
 
 
385 aa  212  5.999999999999999e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  36.31 
 
 
351 aa  212  1e-53  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  38.55 
 
 
414 aa  211  2e-53  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  36.41 
 
 
357 aa  210  2e-53  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  35.97 
 
 
361 aa  210  3e-53  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  33.88 
 
 
399 aa  210  4e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1420  putative PAS/PAC sensor protein  48.21 
 
 
543 aa  209  6e-53  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.108233  n/a   
 
 
-
 
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