| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0913 |
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| Symbol | |
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| ID | 5136628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 931546 |
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| End bp | 933024 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532371 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216859 |
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| Protein GI | 147674798 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.512089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCATTT GGGTTCTATC ACTTGCTATG AAAAACACGA TTTACCATGC CCCACTGACG
TTTGGACTCT ATGCGCTTGC TGGAGTGCTC TTTGCGCTTT ACACAAGCCG AGTCTGTCCT
TTTCTCGCGA CATTAAGCAC TCGTGAAATC GCCACTCAGG TGGGTGCTGT CTTCATCCTC
GCATGGCTGA TTCGGCATAC TCTGCTTCGC CAGCACATTT GGGCAAGAAA ACAGCAATTT
ATCCAATTGG ACACGGCACT CCTCTTCGCA ATGAGCCTGC CTTTAGCGCT TTACTACAAT
CTGCAATACC AGTTCACGTT AGACAGTAAT TTAAAAGTAC TGTTTGGAAT GACCTTATTT
GGTTTCTTCA CCGGAGCGTT ATTGCAATTA AGCAGTAAGT TAAGAACGCT GCGCCAAATG
CCTCAAAGTC AGAACCTTGC TCTCTCTTCT GATGAGCGAC GTTCCTTAGT CAAACAGCTG
ATTGGCTTGA TCGTCCTTTT AATCAGCACA CTGACGGTGA TGCTCAGCAT GGTCGCAATC
AAAGATATTC ACTGGCTGGA AAATAACCCT GCGCGCCTAC TTGATGGCAG TGGCAAGATC
AGCATTGTGA AAGAGTTTGC CTTTTTGTCC TTGGTGTTAG GCGGCTACAT CACGGCCATT
CTCGTACTCT GGAGTCGAGT GATGAAAGAG ATCCTCGACC ATCAGGAGCG CTCATTGCAA
GCCGTGACGC AAGGCAACCT CCAAGTACGC CTTCCCGTCT ACTCTAACGA TGAGTTAGGC
AATGTCGCCA TGTTGACCAA TCAGATGTTA GACAGCTTAG AAGCTACGCA AAATGAGGTC
AAAACCACAC GTGATGTGGC TATCGTCAGC TTATCGGCTC TCGCGGAATC ACGAGATAAC
GAGACAGGGG CACATATTCT TCGCACTCAA GAATACGTCA AAGCGTTAGC AGAATATCTC
GCTGCTTTTC CCCAATATTC AACGCTGTTA ACCCCGGCTT ATATCGAACT ACTCTACAAA
TCCGCGCCAT TACATGATGT AGGCAAGGTT GGCATTCCAG ATTCGGTTCT GCTCAAACCG
GGCAAACTGA CCGATGAGGA GTTCACCGTC ATGAAAGAGC ATCCGCGTAT CGGGGCGCAA
GCACTTGCGA TTGCTGAGCG CCATTTAGGG ACGAGCTCCT TCCTCGCCAT TGCCAAAGAA
ATTGCTCTCA CTCACCACGA AAAATGGGAT GGCACGGGTT ATCCGGCGCA ATTACAAGGA
GAAGCCATCC CGCTTTCCGG TCGCTTAATG GCGTTAGCCG ATGTGTATGA TGCCTTGATT
TCAGCTCGGG TTTATAAACC GGCTTTTAGT CATGACAAAG CCAAAGCCAT TATTGTCGAA
GGCAGTGGTC ACCATTTTGA TCCTGTCGTG GTCGAGGCTT TTCTCGCGGT TGAGGAAAAG
TTCGTGGCCA TTGCAGCACA CTTTAAAGAT GCCGCATAA
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| Protein sequence | MTIWVLSLAM KNTIYHAPLT FGLYALAGVL FALYTSRVCP FLATLSTREI ATQVGAVFIL
AWLIRHTLLR QHIWARKQQF IQLDTALLFA MSLPLALYYN LQYQFTLDSN LKVLFGMTLF
GFFTGALLQL SSKLRTLRQM PQSQNLALSS DERRSLVKQL IGLIVLLIST LTVMLSMVAI
KDIHWLENNP ARLLDGSGKI SIVKEFAFLS LVLGGYITAI LVLWSRVMKE ILDHQERSLQ
AVTQGNLQVR LPVYSNDELG NVAMLTNQML DSLEATQNEV KTTRDVAIVS LSALAESRDN
ETGAHILRTQ EYVKALAEYL AAFPQYSTLL TPAYIELLYK SAPLHDVGKV GIPDSVLLKP
GKLTDEEFTV MKEHPRIGAQ ALAIAERHLG TSSFLAIAKE IALTHHEKWD GTGYPAQLQG
EAIPLSGRLM ALADVYDALI SARVYKPAFS HDKAKAIIVE GSGHHFDPVV VEAFLAVEEK
FVAIAAHFKD AA
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