Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0663 |
Symbol | |
ID | 4016940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 762504 |
End bp | 763526 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637954648 |
Product | response regulator receiver |
Protein accession | YP_561676 |
Protein GI | 91792025 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTCG TTAAAATGCC AATTAAAATA TTAGTCGTCG ATGATGAACC CAATAACTTG CAGGTAATCA ATCAAATACT AGCTAAATAT TACCACTTAT TATTTGCCAA AAATGGAAAT CGCGCCATTG AATTGGCCCA GCAGCAGCAA CCGCAGTTGA TTTTACTCGA TGTCATGATG CCCGACATGG ATGGTTTCGA AACCTGCAGG CGGTTAAAGC AAGACCCGGC AACGGCAAAA ATTCCGGTGA TTTTTGTTAC CGCCATGTCT GACATCGAGG ATGAATATCA AGGCTTTGAG TTAGGTGCGG TAGATTACAT TACCAAACCC ATTAGTCCTG CAACGGTTAG GGCCAGAGTG CGGACGCATT TATCCTTAGT CAGCATTAAT GAATTGCAAG ATACCCGTTT GCAAATCATT CAACGCCTAG GACGAGCTGC CGAGTACAAA GATAATGAAA CCGGTTTACA CGTTATTCGC ATGAGTCACT ACTCCATGCT ATTAGCACGA GCTGCAGGCA TGACAGAGGA AGAGCAAGAC CTTATCTTAC ATGCTGCCCC TATGCATGAT GTGGGAAAAA TTGGCATACC GGATCATATC TTATTAAAAC CAGATAAACT CGATAACGAT GAATGGCAAA TAATGCAAAC ACACGCTAGC ATGGGCGCCG ATATTATCGG CAAGCATGAC TCGCCATTGC TGAATATGGC GTACATCATA GCCTCAACCC ACCATGAAAA ATGGGACGGC TCAGGTTACC CAGAGGGTCT ATCGGGAACA AACATACCTT TAGTTGGCCG TATAGTGGCT ATTGCCGATG TGTTTGATGC ATTAACTTCA GTGAGGCCCT ACAAAAATGC TTGGCCTGTC GATGAAGCCA TTGAGCACAT GGTTTCTTGC CGAGGCAGTC ATTTCGATCC ACACCTTATC GATCTCTTTC TAACTATTTT ACCTGAGATA TTACACATCA AAGAAAAGTG GGCCGAAACC ACAGCGCGAG TCTCTGTAGA ATTAGGTCAG TGA
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Protein sequence | MTVVKMPIKI LVVDDEPNNL QVINQILAKY YHLLFAKNGN RAIELAQQQQ PQLILLDVMM PDMDGFETCR RLKQDPATAK IPVIFVTAMS DIEDEYQGFE LGAVDYITKP ISPATVRARV RTHLSLVSIN ELQDTRLQII QRLGRAAEYK DNETGLHVIR MSHYSMLLAR AAGMTEEEQD LILHAAPMHD VGKIGIPDHI LLKPDKLDND EWQIMQTHAS MGADIIGKHD SPLLNMAYII ASTHHEKWDG SGYPEGLSGT NIPLVGRIVA IADVFDALTS VRPYKNAWPV DEAIEHMVSC RGSHFDPHLI DLFLTILPEI LHIKEKWAET TARVSVELGQ
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