More than 300 homologs were found in PanDaTox collection
for query gene Sden_0663 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_0663  response regulator receiver  100 
 
 
340 aa  701    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  62.31 
 
 
331 aa  425  1e-118  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  62.31 
 
 
328 aa  426  1e-118  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  60.75 
 
 
337 aa  416  9.999999999999999e-116  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  61.37 
 
 
333 aa  417  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  60 
 
 
331 aa  414  1e-114  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  61.56 
 
 
328 aa  411  1e-114  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  59.76 
 
 
340 aa  410  1e-113  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  60.06 
 
 
338 aa  404  1.0000000000000001e-112  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  59.5 
 
 
331 aa  406  1.0000000000000001e-112  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  59.5 
 
 
331 aa  406  1.0000000000000001e-112  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  60.44 
 
 
331 aa  407  1.0000000000000001e-112  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  59.34 
 
 
338 aa  403  1e-111  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  59.34 
 
 
338 aa  403  1e-111  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  58.21 
 
 
346 aa  404  1e-111  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  59.15 
 
 
339 aa  399  9.999999999999999e-111  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  58.73 
 
 
338 aa  400  9.999999999999999e-111  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  57.66 
 
 
338 aa  395  1e-109  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  58.13 
 
 
338 aa  395  1e-109  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  57.66 
 
 
338 aa  394  1e-109  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  57.66 
 
 
338 aa  395  1e-109  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  54.21 
 
 
367 aa  397  1e-109  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  57.66 
 
 
338 aa  394  1e-109  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  58.7 
 
 
331 aa  395  1e-109  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  57.82 
 
 
379 aa  394  1e-108  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_012560  Avin_25160  response regulator  59.63 
 
 
356 aa  392  1e-108  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  56.76 
 
 
339 aa  389  1e-107  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  56.93 
 
 
339 aa  387  1e-106  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  57.1 
 
 
343 aa  386  1e-106  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  57.1 
 
 
352 aa  379  1e-104  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  55.06 
 
 
348 aa  375  1e-103  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  55.06 
 
 
348 aa  377  1e-103  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  51.65 
 
 
363 aa  368  1e-101  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  55.19 
 
 
347 aa  369  1e-101  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  53.67 
 
 
350 aa  363  2e-99  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4003  response regulator  53.62 
 
 
357 aa  361  9e-99  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  51.47 
 
 
360 aa  353  2e-96  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  50.43 
 
 
358 aa  344  1e-93  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  47.13 
 
 
359 aa  325  8.000000000000001e-88  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  45.33 
 
 
354 aa  311  6.999999999999999e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  45.29 
 
 
350 aa  299  5e-80  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  43.32 
 
 
384 aa  299  6e-80  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_008576  Mmc1_2945  response regulator receiver modulated metal dependent phosphohydrolase  45.48 
 
 
377 aa  298  7e-80  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  44.11 
 
 
375 aa  291  9e-78  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  43.91 
 
 
377 aa  290  2e-77  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  43.5 
 
 
365 aa  288  1e-76  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  43.54 
 
 
353 aa  286  4e-76  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  45.03 
 
 
365 aa  284  1.0000000000000001e-75  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  44.54 
 
 
360 aa  283  2.0000000000000002e-75  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  43.79 
 
 
361 aa  282  7.000000000000001e-75  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  43.1 
 
 
391 aa  281  1e-74  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_009457  VC0395_A0963  response regulator  42.74 
 
 
441 aa  279  5e-74  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  42.42 
 
 
377 aa  277  2e-73  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  42.42 
 
 
377 aa  276  3e-73  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_010717  PXO_00476  two-component system regulatory protein with HD-GYP domain  43.22 
 
 
322 aa  275  5e-73  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  41.95 
 
 
363 aa  275  7e-73  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  41.64 
 
 
383 aa  274  1.0000000000000001e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  43.91 
 
 
364 aa  275  1.0000000000000001e-72  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  42.9 
 
 
395 aa  275  1.0000000000000001e-72  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  45.4 
 
 
363 aa  273  2.0000000000000002e-72  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  43.15 
 
 
348 aa  273  2.0000000000000002e-72  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  40.58 
 
 
365 aa  271  1e-71  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  41.23 
 
 
369 aa  269  5e-71  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  41.3 
 
 
350 aa  269  5.9999999999999995e-71  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  41.33 
 
 
379 aa  269  5.9999999999999995e-71  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  41.19 
 
 
367 aa  268  8e-71  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  41.67 
 
 
377 aa  266  4e-70  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  40.52 
 
 
371 aa  262  6.999999999999999e-69  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  42.73 
 
 
345 aa  262  6.999999999999999e-69  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  41.76 
 
 
370 aa  262  8e-69  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  41.29 
 
 
368 aa  256  4e-67  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  41.94 
 
 
376 aa  255  9e-67  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  48.31 
 
 
268 aa  254  2.0000000000000002e-66  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_013552  DhcVS_1406  response regulator  41.83 
 
 
351 aa  253  4.0000000000000004e-66  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  37.28 
 
 
399 aa  251  1e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  40.35 
 
 
359 aa  249  5e-65  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  39.82 
 
 
362 aa  248  8e-65  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2574  response regulator  39.71 
 
 
368 aa  243  3e-63  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  39.52 
 
 
348 aa  243  3e-63  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  37.86 
 
 
351 aa  243  3e-63  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  39.08 
 
 
364 aa  243  5e-63  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  36.83 
 
 
353 aa  241  1e-62  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_009656  PSPA7_5503  response regulator receiver  37.43 
 
 
393 aa  240  2.9999999999999997e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63210  putative two-component response regulator  38.02 
 
 
393 aa  239  4e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  38.19 
 
 
356 aa  239  5.999999999999999e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  37.57 
 
 
362 aa  238  1e-61  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  39.71 
 
 
373 aa  236  3e-61  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  37.08 
 
 
361 aa  235  6e-61  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_010506  Swoo_3823  response regulator receiver modulated metal dependent phosphohydrolase  37.32 
 
 
354 aa  234  2.0000000000000002e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
331 aa  233  4.0000000000000004e-60  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  44.14 
 
 
344 aa  232  7.000000000000001e-60  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008741  Dvul_3024  response regulator receiver modulated metal dependent phosphohydrolase  38.69 
 
 
363 aa  232  8.000000000000001e-60  Desulfovibrio vulgaris DP4  Bacteria  normal  0.433593  n/a   
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  37.22 
 
 
362 aa  232  9e-60  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_010577  XfasM23_0399  response regulator receiver modulated metal dependent phosphohydrolase  34.93 
 
 
384 aa  231  1e-59  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0458  response regulator receiver protein  34.83 
 
 
384 aa  231  2e-59  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0523  Response regulator protein  36.31 
 
 
359 aa  230  3e-59  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  37.88 
 
 
385 aa  229  6e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.57 
 
 
353 aa  228  9e-59  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3169  response regulator receiver modulated metal dependent phosphohydrolase  36.36 
 
 
353 aa  228  1e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.821118  normal 
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  40.19 
 
 
331 aa  228  2e-58  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
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