| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3915 |
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| Symbol | |
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| ID | 5610214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4782707 |
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| End bp | 4783777 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640934869 |
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| Product | response regulator receiver modulated metal dependent phosphohydrolase |
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| Protein accession | YP_001475647 |
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| Protein GI | 157377047 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTAC ATACTCAGGA ACCGGAAACG ATAAATGTCG TTATCTGCGA TGATTCGGTT
ACTAATGTTT TGATCATAGC CGAAATCTTA AAGTCTATTG ATATGGAGCT GAATGTCACG
AAAATCACCG ATCCGCGTAA GGTGATGAAT GAATTGGATA GTCAAGTAAC CCTGCTTATT
TTAGATCTGG AAATGCCCTA TTTTACCGGT TATGAAATTC TCGAAAAAAT CAGAACACTT
TACAGTCCCG AGAAATTACC CGTTATCGTT GTCAGTGGTT TGAGCGATCA AAAGTCTCAA
ATTAAGGCAT TAAAATCGGG TGCAAATGAT TTTATCTGTA AGCCATTTAA TGAGTATGAG
CTCAAACTTC GGGTTATCAA TCAGCTTAAT ATCATGAACG CTTTTAAGCT GCAGTCCAGG
CTCAATCATG AGCTTGAGAA ACGTGTCCAA TTGCGTACCT TCGAGCTCGA ACAGGCGACC
GAATGCCTGG TTAATAAGTT GGCTATGGTT GCCGAAATGC ATGATGAAAA TACCGGACAA
CATATTCTTA GGGTGGGAAA ATATTCAGGA GTGCTGGCTC GGAAGCTAGG GTTAACAGAG
CTGGTGTCCT ATATGATAGA AAAAGCCGCG CCTATGCATG ATATGGGGAA AATCATGATC
CCCGATGAGA TCTTATTTAA ACCGGGTAAG CTTAGCGAAT CAGAACATTT AGTCATGAAG
CAGCACGTTG TAAAAGCGAA TGACCTGTTT GATGACCACC CCTCAATGAT GATTCAAATG
GCTAAATCTA TTGCAGTATA TCATCACGAG AAATGGGATG GTTCTGGTTA CGCTAAGGGT
CTGAAGGGGC ACTCTATTCC GATTGAAGGA CAAATAGTCG GACTCGTTGA TGTATTCGAC
GCGTTAACTA CCGAGAGGCC TTATAAACAT GCATGGACAA TCGAAGATTC GGTTCAATAC
CTAAAAGATC AATCCGGAAG CCACTTCGAT CCTAAGCTCG TTAATCTGTT TGTTGAACAT
CTGCCTGAAA TATTAGAGAT AAAGGCTGCG TTTCCCGAGA AGGCACTATA G
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| Protein sequence | MNLHTQEPET INVVICDDSV TNVLIIAEIL KSIDMELNVT KITDPRKVMN ELDSQVTLLI
LDLEMPYFTG YEILEKIRTL YSPEKLPVIV VSGLSDQKSQ IKALKSGAND FICKPFNEYE
LKLRVINQLN IMNAFKLQSR LNHELEKRVQ LRTFELEQAT ECLVNKLAMV AEMHDENTGQ
HILRVGKYSG VLARKLGLTE LVSYMIEKAA PMHDMGKIMI PDEILFKPGK LSESEHLVMK
QHVVKANDLF DDHPSMMIQM AKSIAVYHHE KWDGSGYAKG LKGHSIPIEG QIVGLVDVFD
ALTTERPYKH AWTIEDSVQY LKDQSGSHFD PKLVNLFVEH LPEILEIKAA FPEKAL
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