More than 300 homologs were found in PanDaTox collection
for query gene Swoo_2978 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  100 
 
 
369 aa  756    Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  57.26 
 
 
383 aa  442  1e-123  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  58.54 
 
 
365 aa  426  1e-118  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  56.58 
 
 
391 aa  418  1e-116  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  56.13 
 
 
395 aa  419  1e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  57.75 
 
 
377 aa  421  1e-116  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  55.21 
 
 
384 aa  417  9.999999999999999e-116  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  57.75 
 
 
377 aa  417  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_009457  VC0395_A0963  response regulator  54.93 
 
 
441 aa  399  9.999999999999999e-111  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  51.9 
 
 
371 aa  391  1e-108  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  52.66 
 
 
365 aa  386  1e-106  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  51.4 
 
 
377 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  55.21 
 
 
360 aa  385  1e-106  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  52.53 
 
 
375 aa  382  1e-105  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  53.52 
 
 
361 aa  371  1e-101  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  51.12 
 
 
370 aa  370  1e-101  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  50.98 
 
 
353 aa  368  1e-101  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  50.56 
 
 
377 aa  367  1e-100  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  51.26 
 
 
364 aa  363  2e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  51.26 
 
 
363 aa  356  5e-97  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  49.02 
 
 
359 aa  347  3e-94  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5503  response regulator receiver  47.01 
 
 
393 aa  328  6e-89  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  47.04 
 
 
348 aa  327  3e-88  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63210  putative two-component response regulator  46.47 
 
 
393 aa  327  3e-88  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  46.76 
 
 
348 aa  324  2e-87  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  46.74 
 
 
376 aa  323  3e-87  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  45.63 
 
 
338 aa  318  6e-86  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  47.61 
 
 
350 aa  318  9e-86  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.73 
 
 
361 aa  315  7e-85  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  45 
 
 
395 aa  314  1.9999999999999998e-84  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  44.51 
 
 
338 aa  313  1.9999999999999998e-84  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  44.51 
 
 
338 aa  312  6.999999999999999e-84  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  44.51 
 
 
338 aa  312  6.999999999999999e-84  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  46.24 
 
 
339 aa  311  7.999999999999999e-84  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  48.08 
 
 
343 aa  311  1e-83  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  45.28 
 
 
346 aa  311  2e-83  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  47.49 
 
 
352 aa  309  5e-83  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  47.29 
 
 
339 aa  309  5e-83  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  47.09 
 
 
338 aa  308  9e-83  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  47.09 
 
 
338 aa  308  1.0000000000000001e-82  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  47.09 
 
 
338 aa  308  1.0000000000000001e-82  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  47.09 
 
 
338 aa  308  1.0000000000000001e-82  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  44.23 
 
 
339 aa  307  2.0000000000000002e-82  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  42.54 
 
 
365 aa  307  2.0000000000000002e-82  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  47.47 
 
 
357 aa  306  3e-82  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  45.68 
 
 
360 aa  305  7e-82  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  41.26 
 
 
364 aa  299  5e-80  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  43.94 
 
 
340 aa  297  2e-79  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  43.45 
 
 
379 aa  291  1e-77  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  41.02 
 
 
367 aa  290  3e-77  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  43.14 
 
 
347 aa  288  9e-77  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  43.59 
 
 
358 aa  288  1e-76  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  43.61 
 
 
373 aa  285  9e-76  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  41.39 
 
 
328 aa  283  3.0000000000000004e-75  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  42.5 
 
 
337 aa  281  2e-74  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  45.33 
 
 
348 aa  279  7e-74  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  41.64 
 
 
359 aa  278  1e-73  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  43.42 
 
 
331 aa  275  6e-73  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  43.82 
 
 
331 aa  275  9e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  40.68 
 
 
337 aa  274  2.0000000000000002e-72  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  43.26 
 
 
331 aa  272  6e-72  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  43.26 
 
 
331 aa  272  6e-72  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  40.95 
 
 
331 aa  268  8e-71  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  41.69 
 
 
331 aa  268  8.999999999999999e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  41.03 
 
 
338 aa  267  2e-70  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  42.23 
 
 
378 aa  265  8e-70  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  40.06 
 
 
328 aa  264  2e-69  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_007778  RPB_2330  metal dependent phosphohydrolase  48.58 
 
 
466 aa  263  4e-69  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.541081  normal  0.158055 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  39.33 
 
 
363 aa  261  1e-68  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  41.23 
 
 
340 aa  259  6e-68  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0913  hypothetical protein  55.27 
 
 
492 aa  258  1e-67  Vibrio cholerae O395  Bacteria  normal  0.512089  n/a   
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  38.64 
 
 
362 aa  258  1e-67  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  38.76 
 
 
333 aa  256  5e-67  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  39.22 
 
 
363 aa  256  5e-67  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  38.76 
 
 
356 aa  256  5e-67  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2231  putative metal dependent phosphohydrolase  57.28 
 
 
440 aa  254  2.0000000000000002e-66  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0632  metal dependent phosphohydrolase  54.05 
 
 
654 aa  254  2.0000000000000002e-66  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.0000219793  n/a   
 
 
-
 
NC_009831  Ssed_3778  response regulator  47.87 
 
 
629 aa  249  4e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  40.34 
 
 
348 aa  247  2e-64  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  39.42 
 
 
379 aa  244  1.9999999999999999e-63  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  40.52 
 
 
368 aa  237  3e-61  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  37.47 
 
 
354 aa  237  3e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_002939  GSU2574  response regulator  38.52 
 
 
368 aa  230  4e-59  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  37.77 
 
 
368 aa  229  5e-59  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  37.54 
 
 
350 aa  229  7e-59  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_007519  Dde_0263  metal dependent phosphohydrolase  48.48 
 
 
579 aa  228  1e-58  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  38.25 
 
 
357 aa  223  4e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  35.88 
 
 
378 aa  222  7e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  38.48 
 
 
350 aa  221  1.9999999999999999e-56  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1891  response regulator  36.67 
 
 
379 aa  220  3e-56  Geobacter sulfurreducens PCA  Bacteria  normal  0.750204  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  38.22 
 
 
362 aa  220  3.9999999999999997e-56  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1407  metal dependent phosphohydrolase  45.95 
 
 
691 aa  220  3.9999999999999997e-56  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  35.1 
 
 
399 aa  219  5e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  38.84 
 
 
367 aa  216  5e-55  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_009943  Dole_1420  putative PAS/PAC sensor protein  45.85 
 
 
543 aa  216  5e-55  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.108233  n/a   
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  37.26 
 
 
357 aa  216  5.9999999999999996e-55  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_010505  Mrad2831_1613  response regulator receiver modulated metal dependent phosphohydrolase  35.03 
 
 
487 aa  214  1.9999999999999998e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.350204  hitchhiker  0.000130728 
 
 
-
 
NC_010717  PXO_00476  two-component system regulatory protein with HD-GYP domain  34.86 
 
 
322 aa  214  1.9999999999999998e-54  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  34.93 
 
 
353 aa  214  1.9999999999999998e-54  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_009943  Dole_1678  putative PAS/PAC sensor protein  49.76 
 
 
625 aa  214  1.9999999999999998e-54  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0321383  n/a   
 
 
-
 
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