| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2248 |
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| Symbol | |
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| ID | 4172402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2731316 |
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| End bp | 2732311 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055258 |
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| Product | response regulator receiver modulated metal dependent phosphohydrolase |
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| Protein accession | YP_661820 |
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| Protein GI | 109898565 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGTG AGCATAATAC CAAGCAAAAA GTACTTATCG TCGATGATGA GCCGGCTAAC
CTAAGAGTAC TAAAGAGGAT CCTTGGCGAT CTATACCGAT TATCGTTTGC CAAAAGTGGT
GAAGAAGCGC TGCGCTTGGT AGAGCGGGAT TTACCCGATT TAATTCTATT AGACGTCATG
ATGCCCGGTA TGACAGGATT CGAAGTGTGT AAAAGTCTCA AAGATAGCCG ACAGACAAGA
GCGATTCCGG TCATGTTCGT TACTGCGCTA AATGACGAAG TTGATGAAGC CAAAGGATTC
GATGTCGGTG CAGTTGATTA CATCACTAAG CCGGTTTCAC CAGCGGTTGT TAAGGCGCGA
GTGCGTACGC ATTTATCTTT AGTACAAGCT GATGAGTTAA GGCGAACCCG TTTACAAGTG
ATCCAACGTT TGGGTAGGGC GTCAGAATAC AAAGATAATG AAACAGGCAC CCACATTTTG
CGCATGAGTC ATTATTCTAA AATTATGGCG TTGGCCTATG GTTTGACCGA AACCGCTGCC
GACAATTTAC TGCACGCAGC GCCCATGCAT GACATAGGTA AAATCGGTAT TCCGGATAGC
ATCATGCTCA AGCCGGGAAA ATTAACCGAT GAAGAGTTCA CTATTATGAA AACGCACCCG
GAAATCGGTG CTGAAATACT GGGTGATTCA GACTCAGATC TGATTGCGCT AGCGAAAACG
GTATCACTAA CACATCATGA GAAATGGGAT GGCACAGGCT ATCCGAATGG GTTAAAGGGA
GAAAATATTC CTCTGGAGGG CCGTATCGTC GCCATAGCTG ATGTGTTCGA TGCACTCACA
AGTAAACGAC CTTACAAAGA TGCTTGGCCC GTACAAGAGG CAGTGGATTT CATTCATGCA
CAAAGTGGTA AGCATTTTGA TCCCGCTCTT GTTGCCTTAT TTAAAGGTTG CTTGCCTGAA
ATTTTAGAAA TTAAGCACCG CTGGCAAGAC GAATAA
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| Protein sequence | MLSEHNTKQK VLIVDDEPAN LRVLKRILGD LYRLSFAKSG EEALRLVERD LPDLILLDVM
MPGMTGFEVC KSLKDSRQTR AIPVMFVTAL NDEVDEAKGF DVGAVDYITK PVSPAVVKAR
VRTHLSLVQA DELRRTRLQV IQRLGRASEY KDNETGTHIL RMSHYSKIMA LAYGLTETAA
DNLLHAAPMH DIGKIGIPDS IMLKPGKLTD EEFTIMKTHP EIGAEILGDS DSDLIALAKT
VSLTHHEKWD GTGYPNGLKG ENIPLEGRIV AIADVFDALT SKRPYKDAWP VQEAVDFIHA
QSGKHFDPAL VALFKGCLPE ILEIKHRWQD E
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