Gene Shewmr7_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3306 
Symbol 
ID4255401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3910170 
End bp3911186 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content52% 
IMG OID638123988 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_739345 
Protein GI114048795 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG CAACAATATT GGTCGTCGAT GATACCCCGG AAAATATCGA TATTTTAGTG 
GGCATACTCG GTGAGGATTA TAAGGTCAAG GTGGCGATTG ATGGACCAAG AGCACTCGCC
CTTGTCGCCA AAACCCTGCC GGATCTAATT TTACTCGATG TGATGATGCC CGGCATGAAT
GGTTATGAGG TGTGTAAGCT GCTTAAGCAG GAACCTCTAA CTTGCCATAT CCCAGTGATT
TTTGTGACCG CATTGTCTGA GGTGGCCGAT GAGACCCAAG GGTTTGAATT AGGCGCCGTC
GATTACATTA CTAAGCCTGT TAGCGCCCCC GTGGTTAAAG CGCGGGTACG AACCCACCTC
GCACTTTACG ATCAAAAGCG CCTACTAGAG CAACAGGTGA AAGAGCGTAC TCAAGAGCTT
GAAGAAACCC GCTTCGAAAT TATCCGCCGT TTAGGCCGCG CCGCCGAATA CAAAGACAAC
GAAACGGGCC TGCACGTGGT GCGTATGAGC CATTATGCAC GGCTGCTGGC CGTGAAATTA
GGCTTGCCTA GCACCTTCTG TGAGCTGTTG TATAACGCCG CGCCCATGCA TGACATCGGG
AAAATCGGCA CGCCCGATGC GGTGCTGAAA AAGCCCGGTA AGCTCGATGC CGATGAGTGG
GAAATCATGC AACAACATGC CGCCATTGGC GCCGAGATCA TTGGCGAACA TGGCGATCCA
CTGCTGCAAA TGGCGCGGCG CATAGCCTTA ACCCACCACG AAAAATGGGA CGGTTCGGGT
TATCCCAATG GCTTATCGGG GGAGAATATT CCCATCGAGG GGCGGATAGT CGCGATAGCG
GACGTTTTCG ATGCGTTAAC ATCTCAGCGG CCTTACAAGG AGCCTTGGAC CATTGAAGCC
ACGGTGGAGT TGCTCGAAAG CCAAGCGGGC AAACACTTTG ACCCTAAGCT GGTGGACGAG
TTTAAGCAAA TTCTGCCCGA GGTGATTGCG ATTCGAGACA CTTATCTTGA ACATTAA
 
Protein sequence
MDKATILVVD DTPENIDILV GILGEDYKVK VAIDGPRALA LVAKTLPDLI LLDVMMPGMN 
GYEVCKLLKQ EPLTCHIPVI FVTALSEVAD ETQGFELGAV DYITKPVSAP VVKARVRTHL
ALYDQKRLLE QQVKERTQEL EETRFEIIRR LGRAAEYKDN ETGLHVVRMS HYARLLAVKL
GLPSTFCELL YNAAPMHDIG KIGTPDAVLK KPGKLDADEW EIMQQHAAIG AEIIGEHGDP
LLQMARRIAL THHEKWDGSG YPNGLSGENI PIEGRIVAIA DVFDALTSQR PYKEPWTIEA
TVELLESQAG KHFDPKLVDE FKQILPEVIA IRDTYLEH