Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2978 |
Symbol | |
ID | 6117293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3644712 |
End bp | 3645821 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641634520 |
Product | response regulator receiver modulated metal dependent phosphohydrolase |
Protein accession | YP_001761344 |
Protein GI | 170727318 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.806511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCGA GCAGGGATAC TTTTGTAAAA GATAAAAAAA CGGTCTTAAT TGTCGATGAT ACGCCAGATA ACCTTAGTCT TCTTCATGAA CTACTAAAGG ATAACTATCA TGTCAAAGCT GCCGTTAATG GTGTGATAGC ACTAAACATC ATTAATAAAG GAGGCATAGA CATTATTCTT CTGGATGTGA TGATGCCTGA GATGGATGGC TATGAAGTTT GTCGCAGAGT GAAGGCTGAT GATGAAATCT GTGACATTCC TATTATTTTT CTTACAGCGA AAACGAGCAT TGATGATGAG ACCATGGGTT TTGATCTTGG TGCTGCTGAT TATCTAAGTA AACCTATCAG TCCTCCTCTG TTATTAGCGC GGGTAAAGAC TCACCTAGAG ATAAAAGCTT CAAAAGATTA TTTAAAAAAT CAAAACATCT TGTTAGAGAA TGAAGTGAAG CGTCGAACTC AGGAGGTGGT GAATATTCAA AATGTGACAA TTACTGCCAT GGCAAATTTG GCGGAGACCC GAGATCCTGA GACAGGGTTT CATATTAAGC GAACTCAGAT CTATATGAAG TTACTTGCGA CTCAGCTTAG TCATAAAGAG CACTATCGTG AGATGTTAAC TCCCGCTTAT ATTGAACAGC TTTTTACCTC AGCGCCTCTA CATGACATTG GAAAAGTGGG GATATCGGAC AGTATCTTAT TAAAGCCAGG TAAGCTGACT AAAGAGGAGT TTGATACGAT GAAAACCCAT GCTTATTTAG GGTTTAAATC GTTAGATACA GCAGAGAAAC ACATGGATCA ATCTGATACG TTCTTGCATA TCGCCAAGGA TATCGCTCAC TATCACCATG AAAAATGGGA TGGTTCAGGT TATCCAGATG GTTTAGTTGG AGAGGCTATT CCCTTGAGTG CCCGTATGAT GGCGATAGCC GATGTGTACG ACGCACTTAT TAGTAAGCGG GTGTATAAAG ATGCGATGAC CCATGAAACC GCATTAGATA TTATTAAGGA GGGGAAGGGC AACCATTTTG ATCCTGAATT AATTGAGGCT TTCCTCGAAG TTGAAGATGA TTTTTATGAG GTTGCATCTA AATACAGAGA TGAAAATTAA
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Protein sequence | MESSRDTFVK DKKTVLIVDD TPDNLSLLHE LLKDNYHVKA AVNGVIALNI INKGGIDIIL LDVMMPEMDG YEVCRRVKAD DEICDIPIIF LTAKTSIDDE TMGFDLGAAD YLSKPISPPL LLARVKTHLE IKASKDYLKN QNILLENEVK RRTQEVVNIQ NVTITAMANL AETRDPETGF HIKRTQIYMK LLATQLSHKE HYREMLTPAY IEQLFTSAPL HDIGKVGISD SILLKPGKLT KEEFDTMKTH AYLGFKSLDT AEKHMDQSDT FLHIAKDIAH YHHEKWDGSG YPDGLVGEAI PLSARMMAIA DVYDALISKR VYKDAMTHET ALDIIKEGKG NHFDPELIEA FLEVEDDFYE VASKYRDEN
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