More than 300 homologs were found in PanDaTox collection
for query gene Lcho_1463 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  100 
 
 
364 aa  731    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  65.92 
 
 
360 aa  473  1e-132  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  63.97 
 
 
375 aa  459  9.999999999999999e-129  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  63.97 
 
 
377 aa  445  1.0000000000000001e-124  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  62.32 
 
 
361 aa  439  9.999999999999999e-123  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  60.66 
 
 
391 aa  420  1e-116  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  59.55 
 
 
377 aa  405  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  58.33 
 
 
395 aa  400  9.999999999999999e-111  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  55.46 
 
 
384 aa  399  9.999999999999999e-111  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  59.27 
 
 
377 aa  401  9.999999999999999e-111  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  55.28 
 
 
371 aa  393  1e-108  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  57.22 
 
 
377 aa  377  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  52.76 
 
 
383 aa  374  1e-102  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  53.22 
 
 
365 aa  366  1e-100  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  51.26 
 
 
369 aa  363  2e-99  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  51.41 
 
 
365 aa  348  7e-95  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0963  response regulator  50 
 
 
441 aa  348  1e-94  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  53.26 
 
 
370 aa  344  2e-93  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  52.38 
 
 
353 aa  342  5e-93  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  51 
 
 
363 aa  334  1e-90  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  49.17 
 
 
359 aa  333  4e-90  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  46.78 
 
 
352 aa  324  2e-87  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  47.61 
 
 
364 aa  308  8e-83  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  46.52 
 
 
346 aa  305  1.0000000000000001e-81  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5503  response regulator receiver  50.15 
 
 
393 aa  301  1e-80  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  47.63 
 
 
365 aa  299  6e-80  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63210  putative two-component response regulator  49.86 
 
 
393 aa  295  8e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  47.31 
 
 
376 aa  295  1e-78  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  45.79 
 
 
348 aa  294  2e-78  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  45.94 
 
 
347 aa  293  3e-78  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  45.51 
 
 
348 aa  291  1e-77  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  43.22 
 
 
343 aa  290  3e-77  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  45.89 
 
 
338 aa  289  5.0000000000000004e-77  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  45.89 
 
 
338 aa  289  5.0000000000000004e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 
339 aa  289  6e-77  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  44.48 
 
 
379 aa  288  8e-77  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  45.61 
 
 
338 aa  288  8e-77  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4003  response regulator  46.11 
 
 
357 aa  286  5e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  45.04 
 
 
338 aa  286  5e-76  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  44.01 
 
 
340 aa  285  9e-76  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  45.04 
 
 
338 aa  283  5.000000000000001e-75  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  44.76 
 
 
338 aa  282  6.000000000000001e-75  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  44.76 
 
 
338 aa  282  6.000000000000001e-75  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  44.76 
 
 
338 aa  282  6.000000000000001e-75  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  45.43 
 
 
328 aa  282  6.000000000000001e-75  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  44.19 
 
 
339 aa  281  2e-74  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  43.87 
 
 
339 aa  280  3e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  45.38 
 
 
350 aa  280  3e-74  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  45.4 
 
 
356 aa  279  5e-74  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  44.01 
 
 
331 aa  274  2.0000000000000002e-72  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  44.08 
 
 
360 aa  273  3e-72  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  42.47 
 
 
367 aa  273  3e-72  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  43.45 
 
 
331 aa  273  5.000000000000001e-72  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  43.39 
 
 
328 aa  269  5e-71  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  43.59 
 
 
395 aa  269  5.9999999999999995e-71  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  42.61 
 
 
337 aa  266  2.9999999999999995e-70  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  42.74 
 
 
361 aa  265  1e-69  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  42.18 
 
 
331 aa  263  3e-69  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  41.74 
 
 
331 aa  263  4e-69  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  41.74 
 
 
331 aa  263  4e-69  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  43.62 
 
 
331 aa  261  1e-68  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  42.9 
 
 
358 aa  258  8e-68  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  41.29 
 
 
373 aa  258  1e-67  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  41.99 
 
 
333 aa  258  1e-67  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  43.63 
 
 
340 aa  258  2e-67  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  41.31 
 
 
338 aa  258  2e-67  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  41.03 
 
 
359 aa  251  1e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  38.78 
 
 
379 aa  247  3e-64  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  40.11 
 
 
348 aa  242  7e-63  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  42.62 
 
 
354 aa  238  1e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_007778  RPB_2330  metal dependent phosphohydrolase  54.77 
 
 
466 aa  238  1e-61  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.541081  normal  0.158055 
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  40.11 
 
 
378 aa  238  1e-61  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  38.76 
 
 
363 aa  235  8e-61  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  39.83 
 
 
362 aa  234  2.0000000000000002e-60  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  40.11 
 
 
363 aa  232  9e-60  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  39.89 
 
 
337 aa  229  8e-59  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_009831  Ssed_3778  response regulator  47.83 
 
 
629 aa  227  2e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2231  putative metal dependent phosphohydrolase  53.43 
 
 
440 aa  226  4e-58  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2574  response regulator  40.06 
 
 
368 aa  225  1e-57  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  39.27 
 
 
350 aa  224  1e-57  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  36.52 
 
 
368 aa  224  1e-57  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_009457  VC0395_A0913  hypothetical protein  53.27 
 
 
492 aa  224  2e-57  Vibrio cholerae O395  Bacteria  normal  0.512089  n/a   
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  36.51 
 
 
368 aa  223  4e-57  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  37.22 
 
 
348 aa  222  6e-57  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  39.49 
 
 
350 aa  221  9.999999999999999e-57  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  38.15 
 
 
399 aa  221  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3823  response regulator receiver modulated metal dependent phosphohydrolase  34.92 
 
 
354 aa  219  7.999999999999999e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  34.86 
 
 
356 aa  216  5e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  41.94 
 
 
385 aa  215  8e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  39.77 
 
 
345 aa  214  1.9999999999999998e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  38.97 
 
 
362 aa  213  2.9999999999999995e-54  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2945  response regulator receiver modulated metal dependent phosphohydrolase  38.27 
 
 
377 aa  213  4.9999999999999996e-54  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1344  diguanylate cyclase and metal dependent phosphohydrolase  35.04 
 
 
701 aa  211  1e-53  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.562433 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  38.23 
 
 
353 aa  212  1e-53  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  39.33 
 
 
353 aa  209  5e-53  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  37.14 
 
 
351 aa  209  8e-53  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  42.02 
 
 
344 aa  207  2e-52  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1420  putative PAS/PAC sensor protein  49.76 
 
 
543 aa  207  3e-52  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.108233  n/a   
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
378 aa  204  1e-51  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_009943  Dole_1421  putative PAS/PAC sensor protein  47.51 
 
 
535 aa  204  1e-51  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0232449  n/a   
 
 
-
 
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