More than 300 homologs were found in PanDaTox collection
for query gene Pmen_0836 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_0836  response regulator receiver protein  100 
 
 
395 aa  790    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63210  putative two-component response regulator  58.63 
 
 
393 aa  423  1e-117  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5503  response regulator receiver  58.16 
 
 
393 aa  415  9.999999999999999e-116  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  50 
 
 
365 aa  362  5.0000000000000005e-99  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  52.96 
 
 
395 aa  351  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  50.55 
 
 
377 aa  335  1e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  50.55 
 
 
377 aa  334  2e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  45.53 
 
 
384 aa  333  3e-90  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  47.75 
 
 
383 aa  327  3e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  50.42 
 
 
391 aa  326  4.0000000000000003e-88  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
369 aa  314  1.9999999999999998e-84  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  47.93 
 
 
377 aa  312  5.999999999999999e-84  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  44.88 
 
 
371 aa  307  3e-82  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  45.81 
 
 
361 aa  303  4.0000000000000003e-81  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  43.25 
 
 
365 aa  292  7e-78  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  43.13 
 
 
375 aa  286  5e-76  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_009457  VC0395_A0963  response regulator  42.15 
 
 
441 aa  281  2e-74  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  44.69 
 
 
370 aa  277  2e-73  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  45.15 
 
 
377 aa  274  2.0000000000000002e-72  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  44.13 
 
 
360 aa  274  2.0000000000000002e-72  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  43.38 
 
 
359 aa  271  1e-71  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  43.59 
 
 
364 aa  269  5.9999999999999995e-71  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  41.69 
 
 
363 aa  266  5e-70  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  41.11 
 
 
353 aa  256  4e-67  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  38.44 
 
 
348 aa  256  5e-67  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  39.55 
 
 
352 aa  255  1.0000000000000001e-66  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  41.71 
 
 
364 aa  255  1.0000000000000001e-66  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  38.17 
 
 
348 aa  253  4.0000000000000004e-66  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  38.59 
 
 
350 aa  251  1e-65  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  41.64 
 
 
346 aa  251  2e-65  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  40.56 
 
 
347 aa  249  5e-65  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  37.47 
 
 
379 aa  244  1.9999999999999999e-63  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  38.4 
 
 
367 aa  239  6.999999999999999e-62  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_004347  SO_4003  response regulator  37.01 
 
 
357 aa  237  2e-61  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  37.26 
 
 
360 aa  230  3e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  38.14 
 
 
343 aa  227  3e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  38.03 
 
 
376 aa  226  5.0000000000000005e-58  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  38.27 
 
 
363 aa  225  9e-58  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  38.89 
 
 
339 aa  225  1e-57  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  37.43 
 
 
338 aa  224  2e-57  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  37.43 
 
 
338 aa  224  2e-57  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  37.15 
 
 
338 aa  224  3e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  36.67 
 
 
338 aa  219  5e-56  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  36.67 
 
 
338 aa  219  5e-56  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  36.67 
 
 
338 aa  219  5e-56  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  36.75 
 
 
359 aa  219  6e-56  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  37.08 
 
 
338 aa  219  6e-56  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  36.83 
 
 
340 aa  219  7e-56  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  36.8 
 
 
338 aa  219  7.999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  38.78 
 
 
339 aa  218  1e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  34.83 
 
 
365 aa  218  1e-55  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  36.03 
 
 
339 aa  215  9.999999999999999e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  37.95 
 
 
356 aa  214  1.9999999999999998e-54  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  36.21 
 
 
358 aa  212  1e-53  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  35.85 
 
 
348 aa  212  1e-53  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  36.11 
 
 
331 aa  210  4e-53  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  34.37 
 
 
331 aa  207  2e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  35.15 
 
 
340 aa  203  4e-51  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  37.64 
 
 
333 aa  203  4e-51  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  35.77 
 
 
361 aa  203  5e-51  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  35.13 
 
 
328 aa  197  2.0000000000000003e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  33.15 
 
 
331 aa  197  2.0000000000000003e-49  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  33.24 
 
 
338 aa  197  2.0000000000000003e-49  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  33.98 
 
 
337 aa  196  8.000000000000001e-49  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  34.54 
 
 
331 aa  194  2e-48  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  34.54 
 
 
331 aa  194  2e-48  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  34.08 
 
 
362 aa  189  5.999999999999999e-47  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 
379 aa  186  4e-46  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  33.43 
 
 
331 aa  186  7e-46  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  29.97 
 
 
348 aa  184  2.0000000000000003e-45  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  33.05 
 
 
373 aa  183  5.0000000000000004e-45  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  31.93 
 
 
328 aa  182  7e-45  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008576  Mmc1_2945  response regulator receiver modulated metal dependent phosphohydrolase  32.11 
 
 
377 aa  178  1e-43  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 
354 aa  173  3.9999999999999995e-42  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 
363 aa  171  2e-41  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2330  metal dependent phosphohydrolase  40.74 
 
 
466 aa  166  5.9999999999999996e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.541081  normal  0.158055 
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  30.46 
 
 
368 aa  165  1.0000000000000001e-39  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  32.34 
 
 
357 aa  162  8.000000000000001e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  34.13 
 
 
378 aa  161  2e-38  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2699  response regulator receiver modulated metal dependent phosphohydrolase  31.32 
 
 
328 aa  160  4e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  31.55 
 
 
351 aa  160  4e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  33.53 
 
 
331 aa  158  1e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_011989  Avi_0523  Response regulator protein  30.59 
 
 
359 aa  159  1e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  33.23 
 
 
345 aa  159  1e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  30.14 
 
 
350 aa  157  2e-37  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  31.46 
 
 
337 aa  157  2e-37  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  30.03 
 
 
368 aa  157  3e-37  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_008576  Mmc1_2528  response regulator receiver protein  49.13 
 
 
378 aa  154  2e-36  Magnetococcus sp. MC-1  Bacteria  normal  0.249668  normal  0.0734484 
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  31.99 
 
 
331 aa  154  2.9999999999999998e-36  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_010717  PXO_00476  two-component system regulatory protein with HD-GYP domain  29.26 
 
 
322 aa  154  2.9999999999999998e-36  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2574  response regulator  30.94 
 
 
368 aa  152  1e-35  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  28.49 
 
 
399 aa  152  1e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  55.38 
 
 
308 aa  152  1e-35  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4465  adenylate/guanylate cyclase  59.09 
 
 
561 aa  151  2e-35  Polaromonas sp. JS666  Bacteria  normal  normal  0.419976 
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  54.33 
 
 
302 aa  150  4e-35  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  45.29 
 
 
384 aa  149  6e-35  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  30.23 
 
 
362 aa  149  7e-35  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  46.67 
 
 
349 aa  148  2.0000000000000003e-34  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  46.55 
 
 
308 aa  148  2.0000000000000003e-34  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  31.04 
 
 
367 aa  148  2.0000000000000003e-34  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
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