More than 300 homologs were found in PanDaTox collection
for query gene Plim_0679 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_0679  response regulator receiver  100 
 
 
337 aa  684    Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  40.68 
 
 
369 aa  274  2.0000000000000002e-72  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  40.8 
 
 
353 aa  270  2e-71  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  41.95 
 
 
361 aa  261  1e-68  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  40.34 
 
 
359 aa  261  2e-68  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  41.39 
 
 
371 aa  260  2e-68  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  42.32 
 
 
373 aa  259  6e-68  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  40.56 
 
 
377 aa  258  1e-67  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_009457  VC0395_A0963  response regulator  41.97 
 
 
441 aa  258  1e-67  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  41 
 
 
378 aa  257  2e-67  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  40.28 
 
 
395 aa  256  3e-67  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  40.56 
 
 
377 aa  256  3e-67  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  40.22 
 
 
370 aa  253  3e-66  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  39.72 
 
 
365 aa  249  4e-65  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  38.1 
 
 
384 aa  248  8e-65  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  41.13 
 
 
391 aa  247  2e-64  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  41.41 
 
 
361 aa  247  2e-64  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  41.74 
 
 
377 aa  246  3e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  40.45 
 
 
375 aa  245  9.999999999999999e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_013522  Taci_1739  response regulator receiver modulated metal dependent phosphohydrolase  40.46 
 
 
362 aa  243  1.9999999999999999e-63  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.0711596  n/a   
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  37.92 
 
 
383 aa  238  1e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  39.52 
 
 
346 aa  237  2e-61  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  41.13 
 
 
377 aa  236  3e-61  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  36.16 
 
 
365 aa  234  1.0000000000000001e-60  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  39.94 
 
 
360 aa  234  2.0000000000000002e-60  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_011312  VSAL_I2231  putative metal dependent phosphohydrolase  52.38 
 
 
440 aa  232  5e-60  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  39.04 
 
 
363 aa  232  8.000000000000001e-60  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  38.31 
 
 
365 aa  231  1e-59  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  37.8 
 
 
356 aa  230  2e-59  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  36.53 
 
 
328 aa  229  6e-59  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  39.89 
 
 
364 aa  229  7e-59  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  36.23 
 
 
337 aa  228  9e-59  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_009943  Dole_1420  putative PAS/PAC sensor protein  51.2 
 
 
543 aa  226  4e-58  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.108233  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  37.03 
 
 
331 aa  225  9e-58  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  38.4 
 
 
360 aa  225  9e-58  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0632  metal dependent phosphohydrolase  52.61 
 
 
654 aa  224  2e-57  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.0000219793  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  37.01 
 
 
350 aa  224  2e-57  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_009457  VC0395_A0913  hypothetical protein  50.96 
 
 
492 aa  224  2e-57  Vibrio cholerae O395  Bacteria  normal  0.512089  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  36.83 
 
 
331 aa  224  2e-57  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  36.83 
 
 
331 aa  224  2e-57  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1421  putative PAS/PAC sensor protein  54.82 
 
 
535 aa  224  2e-57  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0232449  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  36.23 
 
 
331 aa  223  4e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  36.83 
 
 
331 aa  222  6e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  36.71 
 
 
357 aa  221  9.999999999999999e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  36.12 
 
 
331 aa  221  9.999999999999999e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1678  putative PAS/PAC sensor protein  51.85 
 
 
625 aa  221  1.9999999999999999e-56  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0321383  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  37.01 
 
 
328 aa  219  3.9999999999999997e-56  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  36.99 
 
 
357 aa  219  5e-56  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  36.02 
 
 
348 aa  219  5e-56  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  36.21 
 
 
352 aa  219  7e-56  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  36.88 
 
 
338 aa  219  7e-56  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  36.02 
 
 
338 aa  218  1e-55  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0881  putative PAS/PAC sensor protein  52.2 
 
 
537 aa  218  1e-55  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  36.02 
 
 
338 aa  218  1e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  36.02 
 
 
338 aa  218  1e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  36.02 
 
 
348 aa  218  1e-55  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  36.02 
 
 
338 aa  218  1e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  36.01 
 
 
365 aa  217  2e-55  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  36.87 
 
 
376 aa  217  2.9999999999999998e-55  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  37.16 
 
 
379 aa  216  4e-55  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  35.5 
 
 
340 aa  216  4e-55  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  39.47 
 
 
385 aa  216  5e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_009831  Ssed_3778  response regulator  48.46 
 
 
629 aa  215  9e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  36.12 
 
 
333 aa  215  9e-55  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  35.55 
 
 
338 aa  214  9.999999999999999e-55  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  35.55 
 
 
338 aa  214  9.999999999999999e-55  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  37.86 
 
 
362 aa  214  1.9999999999999998e-54  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  37.68 
 
 
399 aa  214  1.9999999999999998e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  37.29 
 
 
350 aa  214  1.9999999999999998e-54  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  35.84 
 
 
340 aa  214  1.9999999999999998e-54  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  35.26 
 
 
338 aa  213  2.9999999999999995e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  37.09 
 
 
354 aa  213  3.9999999999999995e-54  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  35.26 
 
 
338 aa  213  3.9999999999999995e-54  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1281  metal dependent phosphohydrolase  47.39 
 
 
421 aa  213  4.9999999999999996e-54  Shewanella baltica OS223  Bacteria  normal  normal  0.246487 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  37.65 
 
 
358 aa  213  4.9999999999999996e-54  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  36.86 
 
 
364 aa  212  5.999999999999999e-54  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  37.75 
 
 
353 aa  212  9e-54  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_009665  Shew185_3096  metal dependent phosphohydrolase  46.92 
 
 
421 aa  211  1e-53  Shewanella baltica OS185  Bacteria  normal  0.789641  n/a   
 
 
-
 
NC_009052  Sbal_3086  metal dependent phosphohydrolase  46.92 
 
 
421 aa  211  1e-53  Shewanella baltica OS155  Bacteria  normal  0.688804  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  37.43 
 
 
343 aa  211  1e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_004347  SO_0860  response regulator  35.76 
 
 
339 aa  211  2e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  37.46 
 
 
339 aa  210  2e-53  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  34.65 
 
 
348 aa  211  2e-53  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3239  metal dependent phosphohydrolase  47.34 
 
 
421 aa  210  3e-53  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1882  metal dependent phosphohydrolase  48.44 
 
 
428 aa  210  3e-53  Shewanella loihica PV-4  Bacteria  normal  normal  0.898808 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  40.41 
 
 
344 aa  209  5e-53  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  35.36 
 
 
367 aa  209  8e-53  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_002939  GSU1891  response regulator  37.4 
 
 
379 aa  208  1e-52  Geobacter sulfurreducens PCA  Bacteria  normal  0.750204  n/a   
 
 
-
 
NC_012850  Rleg_3169  response regulator receiver modulated metal dependent phosphohydrolase  38.37 
 
 
353 aa  206  4e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.821118  normal 
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  38.95 
 
 
378 aa  206  6e-52  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  33.51 
 
 
367 aa  206  6e-52  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  34.87 
 
 
350 aa  206  6e-52  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  36.34 
 
 
345 aa  205  8e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  35.36 
 
 
348 aa  205  8e-52  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  34.08 
 
 
363 aa  204  1e-51  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3509  metal-dependent phosphohydrolase  36.26 
 
 
351 aa  204  1e-51  Methylobacterium extorquens PA1  Bacteria  normal  0.305053  normal 
 
 
-
 
NC_011757  Mchl_3816  response regulator receiver modulated metal dependent phosphohydrolase  35.99 
 
 
351 aa  204  1e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0960158  normal 
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  34.97 
 
 
361 aa  204  2e-51  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  38.15 
 
 
351 aa  203  3e-51  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_011757  Mchl_0538  response regulator receiver modulated metal dependent phosphohydrolase  38.51 
 
 
363 aa  203  3e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.973232  normal 
 
 
-
 
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