Gene RPB_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2330 
Symbol 
ID3908961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2678109 
End bp2679509 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content64% 
IMG OID637884227 
Productmetal dependent phosphohydrolase 
Protein accessionYP_485946 
Protein GI86749450 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.541081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.158055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTT GGGGTCATTC AGCGGAATGG GGAGCGGGAC GGAGCGGCGA GGCGGTTCGC 
GGCCGTCCGC ACGACGGGTT GCGGTTGCGG CCGCTGCTGG TGTTCGACGA CCCCGCCTAT
GAGAGCGACT TCGTTCGCTA CTACAACAGA TTCTACTATC GCTACGCGCA AGTCAGCCTG
ATCGTCGGGA TGCTGCTGGT GTCGGCCGAT TTCCTCGTCG ACCTGCTCGC ATCCAAGGCC
ACGCCGGCGA ATCTCGATCG CCTACTGCTC TGCGTGCCGC TGCTCGGCCT CGGCCTCGTC
GGCTCGTTCG CCGACTACGC GCGGCGCCAC TGGCAGCCGG TGATGTCCGG ACTGATCACG
GCGATCGCCG GCAGCCTGTT CTGGGTGCTG CTGGTGATCG ACAACCAGGG CGGCATGGGC
ATGACGTCGT GGGTCGGCAT CCTCAACTTC GTATTTCTCG AATTCTATTG CTTCGTCGTT
CTCGGCGTCC AGTTCAGGTA TGCGCTCGCA GCGGGTGCGA TCGTTCTGGC GATGTTCGAA
CTCGCATTGC TGCGCGCGAT CGGCGCGGAC AGCGGCGCGT TTCTGTACTT GTCGTATCAT
GCGGCGACTC TGTTCATCCT GGCCGCGGGC ATCGGCTGGT GGCGGGAATT CCTGCTGCGC
AAGGGGTTTG CGGCGCAGAC CAGCCTGAGG GCGGCGCAGA ACGTCCTGAG GAACCAGAAC
GGCCATCTCG AGCTCGAGGT GGAGAAAAGC ACCCAGCGGA TTCAGCGCAC CCAGGACGTC
ACCATCGAGA TCCTGACCTC GCTGGCGGAG ACCCGCGACA ACGAAACCGG CAACCACATT
CGCCGGACCC AGCATTATGT CAGGGCCCTG GCCCGCCGCC TGCAGTCGCA CCCGGCCTTC
GCGGCCTATC TGGTGGAGGC GCAGATCGAC ATGCTGTTCA AATACGCGCC GCTGCACGAC
ATCGGCAAGG TCGGCATTCC CGACAGCATT CTGCTCAAGC CGGGCAAGCT CGATCCGCAC
GAATTCGAAA TCATGAAGAC CCACACCACG CTCGGTTACC AGACCATCGT GAACGCCGAA
AAGCGGCTCG GCACGCCGGT GGCGTTTCTC GCCTGCGCCA AGGAGATCGC GCTCAGCCAT
CACGAGCACT GGGACGGCAA CGGCTACCCG AACCGGCTGG CGGGCGAGGC GATTCCGATC
TCGGCCCGGC TGATGGCGGT GGCCGATGTC TACGACGCGC TGACCTCGCG CCGGGTCTAC
AAGGACGCGA TGCCGCACGA TCGGGCGGTC GCGATCATCA AGGACGGCAG CGGCCGGCAA
TTCGACCCCG ACGTGGTCGA CGCGTTCGTC GCCATTGCCG CCGATGAATT CAAGACGATC
GCGGCCCGCT ACGCGGACTG A
 
Protein sequence
MSAWGHSAEW GAGRSGEAVR GRPHDGLRLR PLLVFDDPAY ESDFVRYYNR FYYRYAQVSL 
IVGMLLVSAD FLVDLLASKA TPANLDRLLL CVPLLGLGLV GSFADYARRH WQPVMSGLIT
AIAGSLFWVL LVIDNQGGMG MTSWVGILNF VFLEFYCFVV LGVQFRYALA AGAIVLAMFE
LALLRAIGAD SGAFLYLSYH AATLFILAAG IGWWREFLLR KGFAAQTSLR AAQNVLRNQN
GHLELEVEKS TQRIQRTQDV TIEILTSLAE TRDNETGNHI RRTQHYVRAL ARRLQSHPAF
AAYLVEAQID MLFKYAPLHD IGKVGIPDSI LLKPGKLDPH EFEIMKTHTT LGYQTIVNAE
KRLGTPVAFL ACAKEIALSH HEHWDGNGYP NRLAGEAIPI SARLMAVADV YDALTSRRVY
KDAMPHDRAV AIIKDGSGRQ FDPDVVDAFV AIAADEFKTI AARYAD