Gene Shewana3_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3334 
Symbol 
ID4477635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3996281 
End bp3997276 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content49% 
IMG OID639727944 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_870964 
Protein GI117921772 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCTA CATCTGAACA TAAGAAAACC TTATTGTTGG TGGATGATGA GCCCGTTAAC 
TTACGGGTGC TCAAGCAAGT TTTGCATCAG GATTACCATC TTATCTTTGC CAAAAGTGGC
GAGGAGGCCC TGCGCCTCGC GCAAACTGAG TTGCCATCGC TGATCCTACT CGACATTATG
ATGCCCAATA TGACGGGGTT AGAAGTCTGT CAGTTACTGA AAAATATCTC TGAGACTCAG
TCGATCCCGG TGATTTTTGT CACCGCCTTA AATGATGAAC ACGATGAGGC GGCGGGCTTT
GCCGTGGGCG GGGTGGATTA CATTGTGAAG CCGATTTCGG CCACCATAGT CAAAGCGCGG
GTGAAAACCC ATTTATCCTT AGTACAGGCC GATGAATTGC GCCGCACTCG CTTGCAAGTG
ATCCAACGTT TAGGTCGCGC CGCCGAATAT AAAGATAATG AAACGGGCAC CCATGTGCTG
CGCATGAGTC ATTATTCTAA AATTTTGGCT TTGGCCTACG GCCTGAGTGA GGCGCAGGCG
GATGATTTAT TGCATGCGGC GCCCATGCAC GACATAGGTA AAATCGGTAT TCCCGACAGC
ATTATGCTCA AACCGGGTAA GTTGACCGAT GAAGAGTTCG CCATTATGAA AACTCACCCC
CATATTGGTG CCGAAATTAT CGGTGAGGCG GATTCCGAGC TGCTGCGACT AGCCAAATCC
GTCGCGCTGA CTCACCACGA GAAATGGAAC GGCACAGGTT ATCCTAATGG ATTGAAAGGC
GAAGCCATTC CATTAGAGGG ACGCATAGTC GCCCTCGCCG ATGTGTTTGA CGCGCTCACC
AGCAAACGTC CCTATAAAGA GGCTTGGTCA GTTGAGAAGA CCATGGACTA TATCCATGAG
CAGAGCGGAG TGCATTTCGA TCCTGAGCTA GTGCGGTTAT TTACCGACAA CTTAGACAAA
GTGCTTGAGA TTAAAAATAA ATGGATAGAT AGCTGA
 
Protein sequence
MQSTSEHKKT LLLVDDEPVN LRVLKQVLHQ DYHLIFAKSG EEALRLAQTE LPSLILLDIM 
MPNMTGLEVC QLLKNISETQ SIPVIFVTAL NDEHDEAAGF AVGGVDYIVK PISATIVKAR
VKTHLSLVQA DELRRTRLQV IQRLGRAAEY KDNETGTHVL RMSHYSKILA LAYGLSEAQA
DDLLHAAPMH DIGKIGIPDS IMLKPGKLTD EEFAIMKTHP HIGAEIIGEA DSELLRLAKS
VALTHHEKWN GTGYPNGLKG EAIPLEGRIV ALADVFDALT SKRPYKEAWS VEKTMDYIHE
QSGVHFDPEL VRLFTDNLDK VLEIKNKWID S