Gene Shewmr7_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3549 
Symbol 
ID4255855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4210776 
End bp4211822 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content50% 
IMG OID638124233 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_739586 
Protein GI114049036 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAT TCGTAACAAA ACCTACCCTT TTGGTAGTGG ATGACACTCC AGACAATATT 
CAGATCATTC ATGGGATCTT GTCAGAGCAA TACACTATCC GCGCCGCAAC ATCGGGTGAA
AAAGCGTTAA AACTGGCCAG CACCCATCCA TTACCAGAGT TAATCCTACT CGATGTGATG
ATGCCTGAGA TGGACGGCTT CGAAACCTGT CGCAGACTCA AACGCGATCC TGTTACCAGC
AAGATCCCCG TAGTGTTTGT CACCGCTAAG ACAGACACCA TAGACGAGCA AACCGGATTT
GAACTCGGCG CGGTGGACTA TATTTCCAAA CCCATTAGCC CTGCGGTACT GAAGGTACGT
ACTCAAACCC ATTTAGCCTT GAGCAATCAG GCTAGACAAC TTGAGGCACT GGTTCAGCAG
AGAACCCAAG AGCTTGAATC GACTCGTCAT AAGATTATTC AAAAGCTTGG GCTGGCGGCT
GAATATCGGG ATAACGAAAC GGGATTACAT ATCTCCCGCA TGAGCCATTA TGGTCGCATT
CTGGCCCAAC AGGTTTGCAA CTCGCAGGCT TGGTGTGAGA TGTGTTTTAC TGCGCTGCCG
ATGCACGACA TTGGCAAAAT TGGCATCCCA GATTCGATCC TATCGAAACC GGGTAAGTTA
ACCGATGACG AGTGGCAGCA AATGCAGCAA CATGCCAGCT TCGGCGCACA GATCCTCGGT
GACGATGACG ATCCGCTGTT ATCCCTCGCC AAGGAAATCG CCCTCCATCA CCATGAACGT
TGGGACGGGA CAGGCTACCC CCATGGGCTG GCAGGCGAGC ACATTCCATT AAGCGCCCGC
ATTGCCGCCA TTGCCGATGT TTTCGATGCA CTCACATCAA ACCGCCCCTA TAAAGTGGCA
TGGAGTACTG AGCAGGCTTT TGATTACATC CAAGAAAACT CAGGGACTCA GTTTGACCCA
AAGCTTGCCT TTGCCTTTAT CGCCTGCAAA GAGCAAATAC TGCAAATACA ACAACGTTTT
GCCGAGCCGA TAGCCACAGC CCCTTGA
 
Protein sequence
MTPFVTKPTL LVVDDTPDNI QIIHGILSEQ YTIRAATSGE KALKLASTHP LPELILLDVM 
MPEMDGFETC RRLKRDPVTS KIPVVFVTAK TDTIDEQTGF ELGAVDYISK PISPAVLKVR
TQTHLALSNQ ARQLEALVQQ RTQELESTRH KIIQKLGLAA EYRDNETGLH ISRMSHYGRI
LAQQVCNSQA WCEMCFTALP MHDIGKIGIP DSILSKPGKL TDDEWQQMQQ HASFGAQILG
DDDDPLLSLA KEIALHHHER WDGTGYPHGL AGEHIPLSAR IAAIADVFDA LTSNRPYKVA
WSTEQAFDYI QENSGTQFDP KLAFAFIACK EQILQIQQRF AEPIATAP