More than 300 homologs were found in PanDaTox collection
for query gene Avi_4319 on replicon NC_011989
Organism: Agrobacterium vitis S4



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  100 
 
 
382 aa  775    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3169  response regulator receiver modulated metal dependent phosphohydrolase  54.14 
 
 
353 aa  363  3e-99  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.821118  normal 
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  50.57 
 
 
369 aa  327  2.0000000000000001e-88  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  50.57 
 
 
369 aa  327  2.0000000000000001e-88  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_010505  Mrad2831_1613  response regulator receiver modulated metal dependent phosphohydrolase  51.73 
 
 
487 aa  317  3e-85  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.350204  hitchhiker  0.000130728 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  46.15 
 
 
350 aa  300  2e-80  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  47.94 
 
 
378 aa  299  5e-80  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_010511  M446_5359  response regulator receiver modulated metal dependent phosphohydrolase  48.21 
 
 
347 aa  298  1e-79  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0670454 
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  44.5 
 
 
385 aa  295  1e-78  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  45.4 
 
 
363 aa  290  2e-77  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  48.39 
 
 
344 aa  282  8.000000000000001e-75  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  46.15 
 
 
399 aa  282  8.000000000000001e-75  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  44.77 
 
 
353 aa  281  1e-74  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  46.43 
 
 
345 aa  281  2e-74  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_010172  Mext_3509  metal-dependent phosphohydrolase  43.53 
 
 
351 aa  272  9e-72  Methylobacterium extorquens PA1  Bacteria  normal  0.305053  normal 
 
 
-
 
NC_011071  Smal_1828  response regulator receiver modulated metal dependent phosphohydrolase  43.31 
 
 
379 aa  272  9e-72  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.723665 
 
 
-
 
NC_011757  Mchl_3816  response regulator receiver modulated metal dependent phosphohydrolase  43.53 
 
 
351 aa  271  2e-71  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0960158  normal 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  41.67 
 
 
353 aa  271  2e-71  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_011757  Mchl_0538  response regulator receiver modulated metal dependent phosphohydrolase  44.01 
 
 
363 aa  271  2e-71  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.973232  normal 
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  45.18 
 
 
353 aa  266  5.999999999999999e-70  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0523  Response regulator protein  40.65 
 
 
359 aa  263  4.999999999999999e-69  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0458  response regulator receiver protein  44.24 
 
 
384 aa  263  4.999999999999999e-69  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0399  response regulator receiver modulated metal dependent phosphohydrolase  44.24 
 
 
384 aa  263  4.999999999999999e-69  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  43.93 
 
 
347 aa  256  3e-67  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  41.96 
 
 
354 aa  253  4.0000000000000004e-66  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  38.62 
 
 
331 aa  249  6e-65  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  41.1 
 
 
331 aa  246  6.999999999999999e-64  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  42.2 
 
 
328 aa  243  3e-63  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  41.25 
 
 
331 aa  243  3.9999999999999997e-63  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  41.25 
 
 
331 aa  243  3.9999999999999997e-63  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  41.9 
 
 
339 aa  242  7e-63  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
331 aa  241  1e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  42.46 
 
 
356 aa  240  2e-62  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  43.38 
 
 
339 aa  240  2.9999999999999997e-62  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  41.58 
 
 
331 aa  239  5.999999999999999e-62  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  39.69 
 
 
348 aa  236  4e-61  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  40.43 
 
 
350 aa  236  4e-61  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  39.1 
 
 
328 aa  236  4e-61  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  40.13 
 
 
337 aa  235  9e-61  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  47.6 
 
 
268 aa  234  1.0000000000000001e-60  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  39.23 
 
 
338 aa  235  1.0000000000000001e-60  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  38.7 
 
 
379 aa  234  2.0000000000000002e-60  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  39.38 
 
 
348 aa  233  3e-60  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  41.58 
 
 
338 aa  232  7.000000000000001e-60  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  41.84 
 
 
350 aa  232  8.000000000000001e-60  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  42.61 
 
 
340 aa  232  9e-60  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  41.58 
 
 
338 aa  231  1e-59  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  41.58 
 
 
338 aa  231  1e-59  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5340  response regulator receiver modulated metal dependent phosphohydrolase  43.42 
 
 
348 aa  231  1e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.64097  n/a   
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  40.34 
 
 
379 aa  231  2e-59  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  41.84 
 
 
346 aa  231  2e-59  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  41.24 
 
 
338 aa  230  4e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  40.73 
 
 
338 aa  229  8e-59  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  40.73 
 
 
338 aa  227  3e-58  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  40.73 
 
 
338 aa  227  3e-58  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  40.73 
 
 
338 aa  227  3e-58  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2733  response regulator receiver modulated metal dependent phosphohydrolase  42.12 
 
 
346 aa  226  6e-58  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  40.89 
 
 
339 aa  225  8e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3823  response regulator receiver modulated metal dependent phosphohydrolase  38.44 
 
 
354 aa  225  8e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  35.96 
 
 
356 aa  226  8e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5034  response regulator receiver modulated metal dependent phosphohydrolase  43.49 
 
 
348 aa  224  1e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.749308  hitchhiker  0.00297277 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  40.18 
 
 
352 aa  224  2e-57  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  41.05 
 
 
362 aa  224  2e-57  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  41.37 
 
 
360 aa  224  2e-57  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4003  response regulator  41.99 
 
 
357 aa  223  4.9999999999999996e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  36.15 
 
 
348 aa  221  1.9999999999999999e-56  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_010725  Mpop_4963  response regulator receiver modulated metal dependent phosphohydrolase  42.61 
 
 
350 aa  221  1.9999999999999999e-56  Methylobacterium populi BJ001  Bacteria  normal  0.102256  normal  0.0892849 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  40.43 
 
 
333 aa  220  3.9999999999999997e-56  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  40.57 
 
 
343 aa  217  2.9999999999999998e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  37.78 
 
 
367 aa  217  2.9999999999999998e-55  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_007575  Suden_1924  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  35.28 
 
 
367 aa  216  5e-55  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.620973  n/a   
 
 
-
 
NC_002939  GSU1891  response regulator  38.1 
 
 
379 aa  215  8e-55  Geobacter sulfurreducens PCA  Bacteria  normal  0.750204  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  41.67 
 
 
340 aa  215  9e-55  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  40.51 
 
 
358 aa  215  9e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  37.8 
 
 
348 aa  213  2.9999999999999995e-54  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2574  response regulator  41.78 
 
 
368 aa  213  4.9999999999999996e-54  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_011757  Mchl_4913  response regulator receiver modulated metal dependent phosphohydrolase  43.73 
 
 
354 aa  211  2e-53  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.478904  normal  0.760596 
 
 
-
 
NC_010172  Mext_4449  metal-dependent phosphohydrolase  43.73 
 
 
358 aa  211  2e-53  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.508967 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  38.46 
 
 
370 aa  210  3e-53  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_1406  response regulator  36.59 
 
 
351 aa  209  5e-53  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  40.54 
 
 
353 aa  209  6e-53  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  38.17 
 
 
377 aa  209  8e-53  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_009457  VC0395_A0963  response regulator  38.23 
 
 
441 aa  207  2e-52  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  35.93 
 
 
363 aa  208  2e-52  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  36.13 
 
 
365 aa  207  2e-52  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  37.8 
 
 
357 aa  207  3e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  39.15 
 
 
359 aa  206  5e-52  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  37.5 
 
 
357 aa  204  1e-51  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  37.79 
 
 
337 aa  205  1e-51  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  38.57 
 
 
377 aa  205  1e-51  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  36.44 
 
 
368 aa  204  2e-51  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  39.02 
 
 
361 aa  203  3e-51  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  38.53 
 
 
391 aa  204  3e-51  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  35.61 
 
 
365 aa  204  3e-51  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  38.35 
 
 
395 aa  203  4e-51  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  35.33 
 
 
369 aa  201  1.9999999999999998e-50  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  37.46 
 
 
365 aa  200  3.9999999999999996e-50  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  35.21 
 
 
368 aa  198  1.0000000000000001e-49  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  34.93 
 
 
368 aa  197  2.0000000000000003e-49  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  40.66 
 
 
360 aa  197  2.0000000000000003e-49  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>