Gene Cpin_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1791 
Symbol 
ID8357942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2173252 
End bp2173647 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content43% 
IMG OID644963979 
Productresponse regulator receiver protein 
Protein accessionYP_003121488 
Protein GI256420835 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA AAGTAATCTT ACTGGTAGAC GACGATTTGG ATGATCAGGA GCTTTTCGGA 
GAAGCAATGT CTATCGTGGA CAGAGAAGCC TCCTGTTATT TCGCTTCTGA CGGAGAAGAA
GGACTGCGCA TGCTGGAAAA TGAAAGCCTG GAATGTGACC TTATCTTTCT GGATCTGAAT
ATGCCGAAAA TGAACGGCAA ACAGTTTCTC GCTGAGATCA AAAAGAACAA CGCCTACCGC
GACATCCCTG TTGTCATCTT CTCAACTTCA TTGAGAGAAA AAGACGGTAT AGAAACTGCT
GAGATGGGCG CTGCTCATTT TCTTACCAAA CCTTCCAGTT TTGGTGAATT ATGCAAACAA
CTGGAATCCG TATTGACCAA AGCATTGGCT CAATAA
 
Protein sequence
MAKKVILLVD DDLDDQELFG EAMSIVDREA SCYFASDGEE GLRMLENESL ECDLIFLDLN 
MPKMNGKQFL AEIKKNNAYR DIPVVIFSTS LREKDGIETA EMGAAHFLTK PSSFGELCKQ
LESVLTKALA Q