Gene Cpin_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3744 
Symbol 
ID8359912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4706411 
End bp4706815 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content43% 
IMG OID644965913 
Productresponse regulator receiver protein 
Protein accessionYP_003123407 
Protein GI256422754 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.139387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00363561 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGAAA AGATCATTTG TTTTTTAATT GACGACGACG ACGATGACCA GGAAATTTTT 
GCCCTGGCAC TTGATACGAT AGACCCGGAT ATTACTTGCA TCACCGCAAA TGACGGAATC
GAAGCGCTGA ACAAACTTAA TATTGACAGC GACTTTATTC CTGATTTTAT TTTCCTGGAC
CTGAACATGG TGCGGATGAA CGGGAGGGAA TGCCTGACCG AGATACGGAA ACTGCCACGT
CTGAAAAAGA CTCCCGTCAT TATATACTCC ACTTCCTCAG AGCAGAAAGA TATCACCGAA
ACAAAATCGT TAGGGGCCAA TGATTATATC GTGAAACCCC CCAGCATCTC CGAACTTGTT
AAAAGATTGG AGCAAGTTTT GAGAGGTAGA ATTCAGACGA TTTAG
 
Protein sequence
MQEKIICFLI DDDDDDQEIF ALALDTIDPD ITCITANDGI EALNKLNIDS DFIPDFIFLD 
LNMVRMNGRE CLTEIRKLPR LKKTPVIIYS TSSEQKDITE TKSLGANDYI VKPPSISELV
KRLEQVLRGR IQTI