Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3744 |
Symbol | |
ID | 8359912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4706411 |
End bp | 4706815 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644965913 |
Product | response regulator receiver protein |
Protein accession | YP_003123407 |
Protein GI | 256422754 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.139387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00363561 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGAAA AGATCATTTG TTTTTTAATT GACGACGACG ACGATGACCA GGAAATTTTT GCCCTGGCAC TTGATACGAT AGACCCGGAT ATTACTTGCA TCACCGCAAA TGACGGAATC GAAGCGCTGA ACAAACTTAA TATTGACAGC GACTTTATTC CTGATTTTAT TTTCCTGGAC CTGAACATGG TGCGGATGAA CGGGAGGGAA TGCCTGACCG AGATACGGAA ACTGCCACGT CTGAAAAAGA CTCCCGTCAT TATATACTCC ACTTCCTCAG AGCAGAAAGA TATCACCGAA ACAAAATCGT TAGGGGCCAA TGATTATATC GTGAAACCCC CCAGCATCTC CGAACTTGTT AAAAGATTGG AGCAAGTTTT GAGAGGTAGA ATTCAGACGA TTTAG
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Protein sequence | MQEKIICFLI DDDDDDQEIF ALALDTIDPD ITCITANDGI EALNKLNIDS DFIPDFIFLD LNMVRMNGRE CLTEIRKLPR LKKTPVIIYS TSSEQKDITE TKSLGANDYI VKPPSISELV KRLEQVLRGR IQTI
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