| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0424 |
|---|
| Symbol | |
|---|
| ID | 4173813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 502155 |
|---|
| End bp | 502607 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638053427 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_660008 |
|---|
| Protein GI | 109896753 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAG ATTCTGGTGT GATATCTAAA AAGCTCAGGG CAGTGAATTA TATTCTGGTC
GCGGATGACG ACTTGGACGA TCAAGAGTTG ATTCAAGATG CATTAGCTGA CAACGCAATA
GGGACAGACA AACTGCGCTT CGTGAATGAC GGAGAGGAGC TGACACGCTT TTTAGCCGAT
GCGAAAACGT TGCCTAGTAT CATTCTATTA GATTTAAATA TGCCGCGAAA ATCGGGCCGG
GAAGCATTAG ACGATATTAA GCAAAATCCG TCTTTTAAGC ATATCCCTGT GGTGATGTTT
ACCACCTCTG ACTCTGACAT CGATATTAAA GAATGTCATA TGCTGGGGTG TAATGCATAT
TTAACGAAAC CTAATAATTA CTTAGATTTA GTGGGCTCGA TGAAAGACTT AGTTAGCTTT
TGGTTCTTTC AAGCGCAAAT ACTGCACGAT TAA
|
|---|
| Protein sequence | MNKDSGVISK KLRAVNYILV ADDDLDDQEL IQDALADNAI GTDKLRFVND GEELTRFLAD
AKTLPSIILL DLNMPRKSGR EALDDIKQNP SFKHIPVVMF TTSDSDIDIK ECHMLGCNAY
LTKPNNYLDL VGSMKDLVSF WFFQAQILHD
|
|---|
| |