Gene Caci_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3486 
Symbol 
ID8334839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3878602 
End bp3879051 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID644956630 
Productresponse regulator receiver protein 
Protein accessionYP_003114233 
Protein GI256392669 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA CCGCGACCCG TTCCTACGGG ATCCTCTTGG TCGAGGACGA CGCGGCCGAC 
GCGATGCTGA TCCAGGACGC GCTGCTGGAG CGTCCCTCGG AGCACACGAT CACCCAGGTC
GAGGACGGCG TCGCCGCCCT GCACCACCTG AACGATCCCG CGCGTCCGCA CCCCGACCTG
ATCCTGATGG ACCTGAACAT GCCCCGCATG AACGGCCGCG AGCTGCTCGC GGTGCTGAAG
GCCGACCAGG TGCTCAAGGC CATCCCGGTG GTGGTGCTGA CCACCTCCGC CGCGCCGGAC
GACGTGAGCG CGGCCTACCA AGGGCACGCC AACGCGTACA TCACCAAGCC CGTCAACCTC
GACGACTTCG TCTCGGCGGT GCAAAGCATC GACACCTTCT TCCTCGACAC GGCCGCACGG
GTGCCGCGCG AGGGCAAGCC GGGGTTCTGA
 
Protein sequence
MTFTATRSYG ILLVEDDAAD AMLIQDALLE RPSEHTITQV EDGVAALHHL NDPARPHPDL 
ILMDLNMPRM NGRELLAVLK ADQVLKAIPV VVLTTSAAPD DVSAAYQGHA NAYITKPVNL
DDFVSAVQSI DTFFLDTAAR VPREGKPGF