Gene CHU_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1900 
Symbol 
ID4187118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2219795 
End bp2220241 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content34% 
IMG OID638071898 
Productresponse regulator 
Protein accessionYP_678508 
Protein GI110638299 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.176755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0491434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTAT CCAAAAACAT TTATCTCGCT GACGACGATG AAGACGATCG TTTATTTTTT 
CGGGATGCCT TATCAGAAGT ATGTAAAGAA ATGCGGTTAA CGATTGCTAA AGATGGTGTC
GAGCTTATGG ATATCCTGTA TCTTCCGCCC TCTCCGCTTC CTGATGTTAT TTTTTTAGAT
CTGAATATGC CCGTAAAAAA CGGCTTTGAA TGCCTGGAAG AAATAAAAAA AAGCGAATTG
TTAAAACACT TGCCGATTAT TATTTTTTCT ACAACTGTGC AGGAAGAAGC TGTAAACAAG
GTATATAAAG AAGGAGCCAA TTTTTATATC TGTAAACCGG ATAATTTTAA TCATTTAAAG
AAAGCCTTAA AAAAAGTACT TTCAATTGAT TGGCTAAAAG AAGTAAAACA GATTTCCAAA
GAACAATTCA TTGTTTCTGT AGCTTAA
 
Protein sequence
MCLSKNIYLA DDDEDDRLFF RDALSEVCKE MRLTIAKDGV ELMDILYLPP SPLPDVIFLD 
LNMPVKNGFE CLEEIKKSEL LKHLPIIIFS TTVQEEAVNK VYKEGANFYI CKPDNFNHLK
KALKKVLSID WLKEVKQISK EQFIVSVA