Gene Mflv_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0999 
Symbol 
ID4972326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1044294 
End bp1046912 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content67% 
IMG OID640455196 
Productresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001132270 
Protein GI145221592 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGTCC CGGGAGGGGC GCAGGAGCGG ATGGCCATCT CTGTGCTGAT GGACGAAGCC 
CCCGCATTCG AGGATGCGCA ACGGGTTCTG ATCGTCGACG ACGATGCGCG GCTGCGCGAT
CTGCTCTGCA CGGTGCTGAC ACCGCTCGAC TGCGACATCG TGCAGGCCGG TTCCGGCGAG
GAAGCTCTCA CGGTGTTACT GGAACGGCAG GTCGCCGTCA TCGTCCTCGA CATCAACATG
CCGGGCATGG ACGGTTTCGA GACGGCCCAG CTGATCCGCG ACGTCGACGA ACTCGCCTCG
ACGCCGATCA TCTTCCTGAC CGGGCAGGCC GAGGCCGGTG ATCTGCACCG GGGATACGAC
CTGGGCGCGG TGGACTTCCT GGTCAAGCCC GTCGGGCGCC AGGTGTTCTA TGCGAAGGTC
AAAGCGCTGC TGGAGTTGGA CCAGTCGTTC GCCCGGCTGC GCAGCGAAGC CGCGAAACTC
CACGAGGAAC AACTGCAGGC CGCCCGCGCC GCCGAGATCC GTCAGCGTGA CGAGCTGGCC
ATCACGCGGC GGCGGGAGAA GCTGACCAAT ATCTTCGCCG AGGCCAGCAT CGACCTGCCC
TCGCTGGAAC GCACGATCGT CACCGAGTTG AGTCAGATGT TCGACGCCGA ATGCGTACTT
CGACTGCCCA CGCCGGACCA CGGTTGGCAT GAATCGCTGT CGCACACCGA ATCTCGCGGC
GCGCTCGAAC TGTTGCAGGC GTTGATGGCC GACACCGATG CCGAGGCGAT CGCCCGGGCG
GCGAACTACG ACGCGGTGAT GGTCGAGGAG CTGACGGCCA GGAGCCAGCG CTTCGGCGTG
GTCTGTATCG GCCGCGCGGA CGGGCCCCCG TTCTCCGAGA CCGAGGCGGC GTTGTTCCGC
GGGGCGTGCG CGGCAGCGGC GCTGGCCATC TCCAACGCGA CGCTGTACCG GGTGCAGGCC
GAGTACGCGG CCGTCATGCA GGCCACCGGC GACGCGATCC TCGCCGTCGA CGTCTCGGGC
GTCATCCGAA GCTGCAACAA GGCCGCGGCG TCGTTGTTCA CCGCCGGCCA GGACACCGAC
GCGTTGCTCG GCAGGTCCAT CGTCGAATTG GCCGTCGACG CGGAGCGCGG GCGCATGCAG
GAACACCTCG ACGACGCCCT GACGACACGT CAGGAGGTCT CGCTGGAGAT GACGCTGGCC
GCGCACGACG GCCGGCACGT CGAGGTGATG ATCACGTTGT CGCCGATCGG CGATTCGGTG
GACCTGCTGG TCGCCGTCGT GGTCCACGAT CTGACCGAGA TCAAGCACGC GCAGACCGAG
ATCCGGCACC TCGCGAGCCA CGACCCGTTG ACCGACCTGG CGAACCGCCG CCAGCTCACC
GACCGCCTCG CGGCCCTCGC TCGCAACCGG ACGTCCATGG CGACGCTGGT CGCGCTCGTC
TATGTCGACG TGAACCACTT CAAGGCGGTC AACGACACCT ACGGTCACGA CACGGGTGAC
GAACTGCTGC TCGCGGTCGC GACGCGGCTG CGGTCCGCGG TCAGCGAGGA CACCCTGGTC
TGCCGGATCG GTGGCGACGA GTTCGTGATC GTGCTCGAAG ACGTGCTCTC GTCCGCGGCG
GCCGTGGCCG CCGGTGACAG GATCCTCGAA CTCGTGCAGG GGCAGCCCGT GCACTGCGGC
AGTGCGATTC TGCAACCCTC CATCAGCATG GGCATCTCCT GCCTCGGCGC CACGGCCCAC
ACTCCGGAGG AGCTGCTGAC CCAGGCGGAC ATGGCGATGT TCGAGGCCAA GAAGAACCAG
TCGCAGGTGT GCGTGCTCTA CACCGACGCG ATCGGTTCCC GACAGCAGGG AAAGGTCAAC
CTGCGCACCG AGGTGGTCGA GGCCATCGCC CGGTCGGATC TCCGGATGGT CTACCAGCCG
ATCGTGAATT GCGAGACCAA CACGACCTTC GGGGTGGAGG CGCTGCTGCG CTGGCGGGTC
GGTGGCGTCG AGATCCCGGC CGGCGAGATC GTCGCGCTGG CCGAGGATGC CGGGCAGGCT
GCGCGGCTTG GCCGGTGGGT GCTGACCCGC AGTTTCACCG ACTACGCGTC ACTGGGCCGG
GATGATCTCA AGCTGCACGT CAACGTGTCC CCGGAGCAGG TCGTCGACTG CACCTTCCTG
GAGCACCTGT TCAGCACGAC CCGGGACAGC TCGATCGCCG CCGACAACGT CTGCCTGGAA
CTCACCGAGC GGGCGTTCCA CGGTGACCCG AAACCGGCTC ACATCGCGCT GCGTAGCGCG
CGCGATCACG GATTCAGTTT GGCGATGGAC GATTTCGGCG TCGAGTACGC AAGCCTGACC
AACCTCATGC ACGTGCCGGT GAACTGGCTC AAGATCGACC GGTCGTTCAT CGCCGACGTC
CTCGACAACG AGCGCACGCA GCGGCTGGTC CACAGCCATA TCGCGGTCGC GGAGTGCATG
CAGGTGGGCC TCATCGCCGA GGGCGTCGAG GACCAGCGTC AGGCGGACTG GTTGCGGGAC
GCGGGATGCG TTCTGCAACA AGGTTTTCTG TATTCGCATC CCCTCGAGGT GACCGACCTC
GGAGACTACC TGGGCAGTTC CGACGAGAAT TTGGGGTGA
 
Protein sequence
MLVPGGAQER MAISVLMDEA PAFEDAQRVL IVDDDARLRD LLCTVLTPLD CDIVQAGSGE 
EALTVLLERQ VAVIVLDINM PGMDGFETAQ LIRDVDELAS TPIIFLTGQA EAGDLHRGYD
LGAVDFLVKP VGRQVFYAKV KALLELDQSF ARLRSEAAKL HEEQLQAARA AEIRQRDELA
ITRRREKLTN IFAEASIDLP SLERTIVTEL SQMFDAECVL RLPTPDHGWH ESLSHTESRG
ALELLQALMA DTDAEAIARA ANYDAVMVEE LTARSQRFGV VCIGRADGPP FSETEAALFR
GACAAAALAI SNATLYRVQA EYAAVMQATG DAILAVDVSG VIRSCNKAAA SLFTAGQDTD
ALLGRSIVEL AVDAERGRMQ EHLDDALTTR QEVSLEMTLA AHDGRHVEVM ITLSPIGDSV
DLLVAVVVHD LTEIKHAQTE IRHLASHDPL TDLANRRQLT DRLAALARNR TSMATLVALV
YVDVNHFKAV NDTYGHDTGD ELLLAVATRL RSAVSEDTLV CRIGGDEFVI VLEDVLSSAA
AVAAGDRILE LVQGQPVHCG SAILQPSISM GISCLGATAH TPEELLTQAD MAMFEAKKNQ
SQVCVLYTDA IGSRQQGKVN LRTEVVEAIA RSDLRMVYQP IVNCETNTTF GVEALLRWRV
GGVEIPAGEI VALAEDAGQA ARLGRWVLTR SFTDYASLGR DDLKLHVNVS PEQVVDCTFL
EHLFSTTRDS SIAADNVCLE LTERAFHGDP KPAHIALRSA RDHGFSLAMD DFGVEYASLT
NLMHVPVNWL KIDRSFIADV LDNERTQRLV HSHIAVAECM QVGLIAEGVE DQRQADWLRD
AGCVLQQGFL YSHPLEVTDL GDYLGSSDEN LG