Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1464 |
Symbol | |
ID | 8225035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1743207 |
End bp | 1743611 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644929323 |
Product | response regulator receiver protein |
Protein accession | YP_003085875 |
Protein GI | 255035254 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000820366 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.014977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACAC CCGGAAATAT TTCGATTCTC CTGGTAGATG ATGATATCGA CGACCAGGAA ATTTTCCTCC TCACAATTCA GGACACAGGC ACGAATGTAG CCTGCGATTT CGCATGCGAT GGCATCCAGG CGCTCCAAAA GCTGGGCGAG CCTGCCTACA AGCCCAATCT GATTTTTATA GATATCAACA TGCCTAAAAT GAACGGCATG GAACTGCTCG CCGAATTGAA ACAAAACCCA CGGCTGGACG GAACGCCGAT CTATATGTAT TCGACGTCGG ACCAGCGGGA GATCGTGACG CGGTGCATGG AGCTGGGGGC ATCGGGGTTT ATGAAGAAGA GTCCGGATAT TGAAGAGCTC AGAAGAGATT TTATAAATGT GATCGATAAA AGGACTGCCA TATGA
|
Protein sequence | MKTPGNISIL LVDDDIDDQE IFLLTIQDTG TNVACDFACD GIQALQKLGE PAYKPNLIFI DINMPKMNGM ELLAELKQNP RLDGTPIYMY STSDQREIVT RCMELGASGF MKKSPDIEEL RRDFINVIDK RTAI
|
| |