Gene Dfer_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1464 
Symbol 
ID8225035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1743207 
End bp1743611 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content48% 
IMG OID644929323 
Productresponse regulator receiver protein 
Protein accessionYP_003085875 
Protein GI255035254 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000820366 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.014977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAC CCGGAAATAT TTCGATTCTC CTGGTAGATG ATGATATCGA CGACCAGGAA 
ATTTTCCTCC TCACAATTCA GGACACAGGC ACGAATGTAG CCTGCGATTT CGCATGCGAT
GGCATCCAGG CGCTCCAAAA GCTGGGCGAG CCTGCCTACA AGCCCAATCT GATTTTTATA
GATATCAACA TGCCTAAAAT GAACGGCATG GAACTGCTCG CCGAATTGAA ACAAAACCCA
CGGCTGGACG GAACGCCGAT CTATATGTAT TCGACGTCGG ACCAGCGGGA GATCGTGACG
CGGTGCATGG AGCTGGGGGC ATCGGGGTTT ATGAAGAAGA GTCCGGATAT TGAAGAGCTC
AGAAGAGATT TTATAAATGT GATCGATAAA AGGACTGCCA TATGA
 
Protein sequence
MKTPGNISIL LVDDDIDDQE IFLLTIQDTG TNVACDFACD GIQALQKLGE PAYKPNLIFI 
DINMPKMNGM ELLAELKQNP RLDGTPIYMY STSDQREIVT RCMELGASGF MKKSPDIEEL
RRDFINVIDK RTAI